Clone Read LE_HBa0155E05_SP6_200637

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0155E05_SP6_200637
Primer
SP6
ID from Seq. Facility
LE_HBa_155_E05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1429 raw
Sequence
>LE_HBa0155E05_SP6_200637 (raw untrimmed)
AATCACTATCTCGATATACACAATTATNGATANCGNTGTATACAGAGCGAGTGAGAGGTANCACACTCATATNTACATCTACCAGTATGCAGACTATACT
TCTATCGTNNNCNGTAGCTGCCGCCTCAGGCGACTCATATGATCGGGTNATNCTCATCAGACGCGTCGATAACNCTGTAGCGTNCACCACTACAGAAAGG
TGCACCGACTGAGNCNATATTACACATAATATCTNCATGTAGCTATGACAGCAGAGTGCGTGTGAGCGTGCGTCTGTCTNACTCTGTGAGTGTNCACTCG
TNACGTGATGACTAGCTAATTGCCCAAANCTTGTTAAGATCATGACCGCGTGCACTGATGACGCAGTGATCTACNANATGCAATGTCTGCATCGATCGTC
GATAGTGATCGTTNATATAGCNTCGACTATATGCGCGTGCCGCATCTGTGTCATNTGTCTCGCACTACAGTCANAGACACAATAGCCTGTGAGTNCTATN
GAGATNCTATGCNGCTATGACATNATAAGTGATNCANATAACAGAGATATATACTACAGTTCGATGCGATAGCANCNCTCTCGTGCAGAGCTCNATGCGT
CGCGAGCAACTGACCTATCAGCNGATCNGCAGCGCCNTANCNGATCTACTTTCACTGAAGCATCGCACGTACTCNACTGCCTATCTCTCATAGTGAGATG
ATGTGACTAGACACGTTTNGTACTGTGCGCTTTNGTGTGATGCGCGNGTTGTCTATCTTNTGATGTGATAGCACACACTCTCGACTNGANAACANACGNG
ACGCATCGTNTACCTCTCTTGAGTGACGTAATACGTCTTTACGCTTATCATCNTNACGCTCTCGCTACTCACACGTCTACCTACCCTCACCNTCTNATGN
CTGACATGCTACTACATACTTACCTATGTGCTGCTGATTGTCTGTATATATGTGATGCATATAAANCATGTGAGCTATATAAGTAACGATATGCATATGC
TTTNTNGACGATCNGNTACACTTANCTATCTACTACTCTCTCAGATCGCTACATCTCATATACGCTCNATTACTTTNCTATCTGAACCTGATAGCTGCTG
TGCANTGTGTGCGCTTTCTTACTTTCTCAACACTAATGCGTGTCTAGACAGTTTCGCACACAACGTANGCCTCTCACACATGTATGCTCACTGACNCCTC
TCTCTCGTATCCACGCGACTTTCTCGCGCTGTGCATCTGCTNATAGCTACTCACAGATANTCGCTCGCGTNATGGTGCGTTGTNCTACGTACGTGCATGC
AATGCTGTCATCGANANACANTGANCTCGCATTTACGTCATATGCATAATAGTCGAATCTAATCTCANATCGCATATACTCATGTACTATCCGATCTATT
ATCTCTTATTCTTCTTTTACTATTATATA
>LE_HBa0155E05_SP6_200637 (trimmed for quality and cloning vector)
GT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.30601
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0155E05
Clone
Clone name
hba-155e5
LE_HBa0155E05
C02HBa0155E05
P155E05
Clone type
BAC
Contamination
none
Estimated length
138,754
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found