Clone Read LE_HBa0155D20_T7_200620

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0155D20_T7_200620
Primer
T7
ID from Seq. Facility
LE_HBa_155_D20-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1220 raw
Sequence
>LE_HBa0155D20_T7_200620 (raw untrimmed)
GACCTTCATGACTGCTTCTAATACNCGTCGCTAGTAAGTGGGCGCGCGCCTCTCCGTCTCGTCATCTAGTGGGGAGAGCCGATCTGATTGGTGGTCGCGT
GTAGGTGCTGTGTGCGCGCACTCGGCAGCACTTGCAGCGTCTGTCTGAGTCACGAGAGCACGACACATCCGAACAGAACGTCCTGCCATCNACAAGTGAT
TGAGTAGATAACAGACTAAGGCGATTNCATCTCATNTACACATGCTCTCACTTAGCGCTCCTGTTAGGCTGATGTGATATGATATAGTTGATTGCAGACC
TGCTCGAGACTGTTCCATGGGTGNAGAGTTGGAGATCTGATGACGTACTGTGAGAANCATGCGAAGGCGCGACCGCGTGGCTTGCGGGTGCGTGTCCCGC
TGATGCTCACCGCAGCACTCCACATGCGTGACTCTCGCTGACGCCTGTGCCCGTACTGCCCACACCTGTTAATGTGACTGAGGAGTGCTAGAACANGGTT
CTGTGGTCGTATACGCGATGCGCCAGTGAGTGGTCGTTACTACACTACTCAGCTGTGCTATACACAGCTCGTGTAGGACGACATGGAGATGTTACTGCTA
TTCGAAATCCTCTGATGACATACGNCGACCACCGACGAACACGNACTGACGCCTCCTGCTCTAGAGATCTCATAAACACATACTAGTTCGAGCGCCGTGC
TACGCCGGCGATATCGGACATGCGTCTGNGTAGGCTCACTAGTGAAGCTCTTCACACTACGCTCTAAGTCGTCGTAGCATCTGTGTCGCTCTGTCTCTGA
GNCAGCATATCAGAGCGATCGCATAGCGAATGNAATCAGATTGGATCTGACATCCTGNGTGAATTACGCGTGTANAGATTGATGATTGACTACATACTGC
AACTGCGTGCCGACGAGTACTGAGGNGCGCTCAGATAGACAGTAAGATCTAGGCGAGCGACNCATGCGCGNCTNTCAATGTCAGGCGTGTCGCGCTGACG
CGGTGTGGTGAGCGTGTACNGCGCGATCGACAGTGGACACAGTACTACAGATGATATGATGCATACAGNCTCANGACGTCCGTGACATACGTCTGCCATC
GTCCAGCTGATGATCTCAGCAGANACTATGTGTATGTGGNGTCTATGTACTAAGCCTTCNACGCGCTTTAGTGTGCTAGTGATATACNACCCACCGCACA
TCGTCANAGTGAACTCTTTN
>LE_HBa0155D20_T7_200620 (trimmed for quality and cloning vector)
TG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
8.17506
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0155D20
Clone
Clone name
hba-155d20
LE_HBa0155D20
C02HBa0155D20
P155D20
Clone type
BAC
Contamination
none
Estimated length
99,378
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found