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Clone Read LE_HBa0078I09_SP6_19216

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0078I09_SP6_19216
Primer
SP6
ID from Seq. Facility
LE_HBa_078_I09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
572 trimmed for vector and quality, 915 raw
Genbank Accession
DU036622
Sequence
>LE_HBa0078I09_SP6_19216 (raw untrimmed)
CGGACGCATGGGGAGGTTTTATAAGAAGGGAGGATTGGAGTTTCTGAGCTTCATCCCTTAAAAGTGTGAGTGAGTGCAAATATTTTGTGCCCTATCCCTC
ACTTTTAAAAAATTGCAACAAAAATTAGTGACAGATTATAACATCCGTCACTTTCAAATAAATATATATATCTAGAAAAAATTATATTGACAGATATTTT
CGTCACTGTATAATATAAATTTTACAAATATATATATATAAGTTTAGCGACCTTTTTTATGTCGCTAGTTTTGTCGCAAAAAATTAATTTAATTTGTCAC
CCTTATTTTGTTTCTAAATTCATAGGGATAATTAGGCGCCAAAATTTCGTGCTAATATTTAGCGATGAGTTAAATATTCCGTTGCAAATTCATCGCTATA
TTATAAATCAAAAAATCAATTGTTAATTTTGCAATAAAATGATAATTCCGTCACAAATCCGTCGTTATATAGTGATGGAATATAGTTTATTGCTAAAAGT
TATTTTTTAGTAGTGAAATATATCTATGATAATTTAGTGAAATATGATTATATTGTATTTTGTTTTTTCTTAAAATTTAAATCTAGCTGAAGTTCATCGA
TCTCTAACTTTTCTTATTGCATCCAAGAGCTCCAATGTTGTCTTTTTGAACTGCACCATACATTTGTGAAGAGTTCAAGATGCGATAAGTGCTTCCTTAT
GTGTAACTAGTCCCAAGGGTATAGTATCCTCTTCAACTTCATCCTCACATTCTTTTCCACATAGCTATTTTCAATGATACATATCACTGTGAACTTGTAT
CACTTTTTAACTGTTTATCCAAACAATCTTTACCCTTATTTTATTGTGGTATACCAAAAACCGTGCCCCACCTCCCAACAATCCTTCCTCCCCCCTCAAA
TGCTAAACTACCTTT
>LE_HBa0078I09_SP6_19216 (trimmed for quality and cloning vector)
TGGAGTTTCTGAGCTTCATCCCTTAAAAGTGTGAGTGAGTGCAAATATTTTGTGCCCTATCCCTCACTTTTAAAAAATTGCAACAAAAATTAGTGACAGA
TTATAACATCCGTCACTTTCAAATAAATATATATATCTAGAAAAAATTATATTGACAGATATTTTCGTCACTGTATAATATAAATTTTACAAATATATAT
ATATAAGTTTAGCGACCTTTTTTATGTCGCTAGTTTTGTCGCAAAAAATTAATTTAATTTGTCACCCTTATTTTGTTTCTAAATTCATAGGGATAATTAG
GCGCCAAAATTTCGTGCTAATATTTAGCGATGAGTTAAATATTCCGTTGCAAATTCATCGCTATATTATAAATCAAAAAATCAATTGTTAATTTTGCAAT
AAAATGATAATTCCGTCACAAATCCGTCGTTATATAGTGATGGAATATAGTTTATTGCTAAAAGTTATTTTTTAGTAGTGAAATATATCTATGATAATTT
AGTGAAATATGATTATATTGTATTTTGTTTTTTCTTAAAATTTAAATCTAGCTGAAGTTCATCGATCTCTAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.892288
Expected error %
0.600222
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0078I09
Clone
Clone name
hba-78i9
LE_HBa0078I09
P078I09
Clone type
BAC
Contamination
none
Estimated length
96,046
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found