Clone Read LE_HBa0076J09_SP6_17728

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0076J09_SP6_17728
Primer
SP6
ID from Seq. Facility
LE_HBa_076_J09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
556 trimmed for vector and quality, 868 raw
Genbank Accession
DU035424
Sequence
>LE_HBa0076J09_SP6_17728 (raw untrimmed)
TATGTGGGAGAATTGCTTTGCTTGATCACGAATCTTCGAGTGGAGGTAGGTTATGGTTTTTATGCTATCTTACTCTTAAACTCTTAATAGCAGAATGAGA
TGTGCTGGTAGTATTGTAAACCCTTCTATATGCTTAATTGTATGTTTGCATGAATATGATTATGCGATTGTGATAAAATAAGCATGACGAAGTTATTGAA
TCCAAAATCTTGAAAGAAACCCTAATTCACATGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATAAATTATATAATGAGATTGATGATGCCTTGG
AATAAAAGAAGGCTTGATTAATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAAATAGAGGATCGGGCGCCACGTTCCGGTACAAGGATAGAAT
GAGGATCAGAGTGTCACGTTCCGACACCAGGATAGTATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGAGGATCGGAGTGTCACATTCCG
ACACCACGATAGTATATGGATCGGGTGCCACATTCCGGTACCAGGATAGAATATGGATCGGGTTTCACGTTCCGACACCAAGATAGAATAAGGATCAGAG
TGTCACGTTCCGACCCCAGGATAGTATATGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAAGACGATAATATATTT
CAAATCTAATGAACCAATTTCCCAAATGAAAATGATGAGGAAGCTTGAGCCCTCCCTTGATGGTGCTGGTGGTTTTTAACTAAGGGTTATGGTAAACGGT
AAAGGCTGTAATGCAAAAGGATTTTAACTTAATTTTCGATCATGCCTTGATTTGGGATCGTCTCTCTG
>LE_HBa0076J09_SP6_17728 (trimmed for quality and cloning vector)
TTTGCTTGATCACGAATCTTCGAGTGGAGGTAGGTTATGGTTTTTATGCTATCTTACTCTTAAACTCTTAATAGCAGAATGAGATGTGCTGGTAGTATTG
TAAACCCTTCTATATGCTTAATTGTATGTTTGCATGAATATGATTATGCGATTGTGATAAAATAAGCATGACGAAGTTATTGAATCCAAAATCTTGAAAG
AAACCCTAATTCACATGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATAAATTATATAATGAGATTGATGATGCCTTGGAATAAAAGAAGGCTTG
ATTAATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAAATAGAGGATCGGGCGCCACGTTCCGGTACAAGGATAGAATGAGGATCAGAGTGTCA
CGTTCCGACACCAGGATAGTATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGAGGATCGGAGTGTCACATTCCGACACCACGATAGTATA
TGGATCGGGTGCCACATTCCGGTACCAGGATAGAATATGGATCGGGTTTCACGTTC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.963145
Expected error %
0.549102
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0076J09
Clone
Clone name
hba-76j9
LE_HBa0076J09
C02HBa0076J09
P076J09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found