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Clone Read LE_HBa0076C23_T7_17421

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0076C23_T7_17421
Primer
T7
ID from Seq. Facility
LE_HBa_076_C23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
200 trimmed for vector and quality, 819 raw
Genbank Accession
Sequence
>LE_HBa0076C23_T7_17421 (raw untrimmed)
ATTCTCCCCTTCTTCCCTCACGTGTTTCCTCTACACTCTACCTGCAGGCATGCAACCTTACCTCTGCTCCGGTGTTGACCCTACCTGATGGCAATCAAGG
CTTTGCGGTGTATTGTGATGCTTCCCAAGTGGGCTTAAGATGATTTCTCATGCAACATGGCAAGGTGATTGCTTAATCTTCTAGGCAACTCAAGGTTCAT
GAGAATCATTACCCAACTAATGATCCTGAGTTATCTGCTGTAGTTTTTGCCTTGATAATATGGAGGCATTATTTATATGGTGTGCATGTTGATGTGTTTA
CTGACCACAAAAGTCTTCAATATGTGTATACACTAAAGGATTTGATTCTTTGAAAGACAACATAGTTACATCTCGTCGAAGGATTATGACATGATTGTCC
TTTATCACCCTCGGTAAATCCAATGTGGTTGCGGATGATTTAAGTCAAATGATTCATGGGTAGTGTGTCTCATGTGTATGAATATATGAAACAACTGCGA
TCGATGTTCATATGTTGGCTCGGTTATGTGTGATCTTAAAAGATTCTTCATATGCGGGTTTTCACGGTCCATCATAACTACCTACCCACCATTAGTGCGT
TCAGGTGACATCTATCTACTACCCCTGTCCCTCTATTCTTGGTCCTACAAGTACATTATTCCTTACCTAACCCTCCACAACTCCATCCCCCCCTCTCTCG
GTTCCCCCCCCCCCTCCCTCTCTTCTACACCCAAATTCTACCCCTACTTCCCACCGTCTTCCTAACAAATCACATATCCTTATACCCACCTCTTATCATA
CTGTTCTCCTTCATTATTT
>LE_HBa0076C23_T7_17421 (trimmed for quality and cloning vector)
AAGGCTTTGCGGTGTATTGTGATGCTTCCCAAGTGGGCTTAAGATGATTTCTCATGCAACATGGCAAGGTGATTGCTTAATCTTCTAGGCAACTCAAGGT
TCATGAGAATCATTACCCAACTAATGATCCTGAGTTATCTGCTGTAGTTTTTGCCTTGATAATATGGAGGCATTATTTATATGGTGTGCATGTTGATGTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.925909
Expected error %
0.899188
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38744.1| Score 100 E Value 1e-20 Identity 23.70% Align. Length 197bp (98.50%) Frame 1
putative gag-pol polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38724.1| Score 100 E Value 1e-20 Identity 23.70% Align. Length 197bp (98.50%) Frame 1
putative retrotransposon protein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0076C23
Clone
Clone name
hba-76c23
LE_HBa0076C23
P076C23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found