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Clone Read LE_HBa0076C23_SP6_17420

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0076C23_SP6_17420
Primer
SP6
ID from Seq. Facility
LE_HBa_076_C23-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1160 raw
Sequence
>LE_HBa0076C23_SP6_17420 (raw untrimmed)
CATTACCGCGCCCTATAATTTGTCATACGCGAATCACTGTTCTAACACAACCTCGGTTATAACCTGTCGCTATTCGGTAGCACTTCGAACTGCTTACTTC
GAGTGATCACCATCTTACTACCTATGCTTAATGCGCATCCTGAACTATCTGCTGCGCAAGGGGTACGCCTTAAATGAGGCTATCAAAGCCTTGATTGGAC
CGCGTATATATCTATTTAGTTCCTAGCGTGATCGTTACTTATCTTCACCTTCGACTTCTTAGCCGATCATCTGCTTATAGCATGGAATAGCACACACTAC
GAGTCTTCTTCTACCCAAGTGACAATCTACAACGAATAGTAAAGTGCAAGTTAAGAGATTGCGTTTTACCCTGAATGTCGTGGCGGTCCACTACATAATG
TCCGTATTTCTTCTCTGTTGCGGTCAACATCACATCTCTTGTCATACTTCTCTATTTGATGCAGTGCTATGCTCTTCAGTACATTTGAGGCTATCATACA
GATAGATAACTAGATAACTGTGTAGAGTGTAACACGCTATCATCTTCCAGATACGTATTCATCGTCACATGCGCTCCAAAACGGTTAGGACATGATATGC
CTATACTAGAACGACGTCATAACGAAAATCGAATTAATTGGATAAGCTGCAATACACACTAATCATGACTGCACCTCCTTAAAAGCTCTACTCTCCCTCC
AGAAACTATAGTGCATTTTTCTCACTACTTTACAGAAAACTCCCACACTCTAGGTTACTACCCATTACAATATTACATCGGCCGTCACTCTCGACTGAGT
TATTGTAACATCGATCTCGCTACATCTTGAACGACATTCCTGACACATCGCATTCTGCCTCACCAATATCGCTCCAGATACTCATCATCTCACACACGCG
CTTATTTGTGGGGTTCGCACAGTGATGTCTCGACTAAACATTGTCTTCATATTCATTTTTGCTACTAAAATCATAACGCCTTTCATTCTATTTGCATTTC
CCTCTTGGACATCGACTTCGCTTCACTCTCACCACCAAGCCACCATACTCTTCACCAATCTGATGCTACAACATAAATTCCTCTACTGTATCTATTAATC
CTCACCCGCCCTGCTATAAACGGTCAGTATGTTGTAACATGACCTGTTCACGAACATCTC
>LE_HBa0076C23_SP6_17420 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.66405
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0076C23
Clone
Clone name
hba-76c23
LE_HBa0076C23
P076C23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found