Clone Read LE_HBa0169H11_T7_14008

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0169H11_T7_14008
Primer
T7
ID from Seq. Facility
LE_HBa_169_H11-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
166 trimmed for vector and quality, 867 raw
Sequence
>LE_HBa0169H11_T7_14008 (raw untrimmed)
TCGGTCCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGTTCAGTATTTTCCTCTGCCTAGAATACACCATTGCCTCCTGTTTGCATTA
CGCAATGTGTCGCATCTTCTAAAATTGAGAATACACCGAAATGTCTGGGAACTGTGGAAGCCATAAATTTATTCCTTTCATTGAGTGTTTATCTACTGCA
AATTAATGGACAAGGAAGTTTCTGTGAGGAGTCAAGTATACTCACACCACCCAGTCTCATGGAAGACAAGTAACGGATTGTATGTGTACGCACGCCGTCA
CGAATACGCCAATATGGTCTCAGAATGCTTACAACGTGCTGGTCCATACTTAACTGTCTCGTGGTGGCTATCATATCTTTTATTTACTCAATTCCGTCTT
ACCTTTTTTTTTTACTCTTGTTTGTTTTCTGAGTTGAACTTCACACATGTTACTATAGCTTTGAGCAATGACTTATCACTCAACTCATAATTCAGCATCT
TATATCTTACAACTTACCACTCTATCTCTCTTATGCCATCATTTAGCTATGCATATTCCATCTAGAGTTTCTCTGGCTCAAATAAACTTCTTAGTTTGAT
CCTAATTTTATACCTTGCTTTCCCTATCAAACTTCTTTATTTTGAAATTTTCAAACGCTCTTACTTAATTCTATATTGTACGCTCTACAATCATGAATCT
ATTGAAATTTCGCTATAACTTAGTTCGTTTCTCTCTCATCGACTCTCTATTTTCTCTTATATTAAACTTTTTGACTTATCGGTTTATTGTGTTTCTTTTT
ATTGCTATCAACTTTTTTATCATTTCTTAATTTCCTTGTATTATTCTTTCCTATTTTTTTACTCTTG
>LE_HBa0169H11_T7_14008 (trimmed for quality and cloning vector)
AGCTTGGTTCAGTATTTTCCTCTGCCTAGAATACACCATTGCCTCCTGTTTGCATTACGCAATGTGTCGCATCTTCTAAAATTGAGAATACACCGAAATG
TCTGGGAACTGTGGAAGCCATAAATTTATTCCTTTCATTGAGTGTTTATCTACTGCAAATTAATGG

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.935289
Expected error %
5.99802
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0169H11
Clone
Clone name
hba-169h11
LE_HBa0169H11
P169H11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found