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Clone Read LE_HBa0031J01_SP6_139813

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0031J01_SP6_139813
Primer
SP6
ID from Seq. Facility
LE_HBa_031_J01-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
639 trimmed for vector and quality, 917 raw
Genbank Accession
DU048500
Sequence
>LE_HBa0031J01_SP6_139813 (raw untrimmed)
TTCTATATTACCACAAAGGTGGACGGGGAAATATAGCTCTGTCTTCATTAACCATATAAGCTCTTTCTAGGAGTACTCATCTCCCTTTGCTTTTCTTTCG
AGACCTCATGAGCTGAGGTATTCAATGTGCCCATGGGTGACTTGATCATTGAATTGGGTTTGAGCGACATGGCAGCATCACTTTCTTCACTAATCTTAGA
TACTTCACGATTAGAGATATATGTAGGACCCATAACACTATCGTTATTTCAGTCTGCATGCTACATACTCCAATTGGTGTGCTAACTAATTGTATATTAT
TATTATTAAAATCGGCTCGAAATAAAGTTTGCTAAATCTTGGGATTAGAATCAACTAACTATAATTCTTTCTCCACCTCAAGTGCTTCAAATGGATTTGT
ACAAACAATGTCATTCAGTTCATTAGATTGCGCTAGTAGATTAGTAGTTAGCTATTGCTTATTTTCACGACGTGGATATTTCCTTCAACTTGCCGAGGAA
CTAATCCACATAGACATTGATTTTTTTTGTGCAATTGTATTCTGATTCCCAGTTGCATTCTAATCACGACCGAAAATTTCAACCTGCAAATCGACAGGTT
CAAAAGGTTGCAAATCACCTATTTATGATCCTTCAAATTTTTGTCCATCAATGGCCAAATTCTCAAGTTGCACATCAGATTTTGGCGTCTGTATAGCATC
GTGAAGTTTCTCAACAGTATGCTTATCACCTTGCCCTATATTTTGAATTTTCAGCAACAACTCCCTTCTCTTTTATCTTGTTAATTTTTGGCCCAATTCT
GCCTCATTTTGATTTATTTGAATCAACAACCAGTTTCTCTCCAAATTAACACCCTCAGCTGAAATACATCTTTTTTAATGGGAAAAAATTTTCGCTTAAA
CAATCCTAAACTGGAAA
>LE_HBa0031J01_SP6_139813 (trimmed for quality and cloning vector)
TCTAGGAGTACTCATCTCCCTTTGCTTTTCTTTCGAGACCTCATGAGCTGAGGTATTCAATGTGCCCATGGGTGACTTGATCATTGAATTGGGTTTGAGC
GACATGGCAGCATCACTTTCTTCACTAATCTTAGATACTTCACGATTAGAGATATATGTAGGACCCATAACACTATCGTTATTTCAGTCTGCATGCTACA
TACTCCAATTGGTGTGCTAACTAATTGTATATTATTATTATTAAAATCGGCTCGAAATAAAGTTTGCTAAATCTTGGGATTAGAATCAACTAACTATAAT
TCTTTCTCCACCTCAAGTGCTTCAAATGGATTTGTACAAACAATGTCATTCAGTTCATTAGATTGCGCTAGTAGATTAGTAGTTAGCTATTGCTTATTTT
CACGACGTGGATATTTCCTTCAACTTGCCGAGGAACTAATCCACATAGACATTGATTTTTTTTGTGCAATTGTATTCTGATTCCCAGTTGCATTCTAATC
ACGACCGAAAATTTCAACCTGCAAATCGACAGGTTCAAAAGGTTGCAAATCACCTATTTATGATCCTTCAAATTTTTGTCCATCAATGGCCAAATTCTCA
AGTTGCACATCAGATTTTGGCGTCTGTATAGCATCGTGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.961861
Expected error %
0.0932
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0031J01
Clone
Clone name
hba-31j1
LE_HBa0031J01
P031J01
Clone type
BAC
Contamination
none
Estimated length
100,455
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found