Clone hba-31j1
 Clone and library
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Clone and library
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| Physical mapping
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| Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg49 : [coherent], 13 members:
LE_HBa0008C01, LE_HBa0031J01, LE_HBa0099L02, LE_HBa0117K05, LE_HBa0251K24, LE_HBa0260K09, LE_HBa0262P20, LE_HBa0272A15, LE_HBa0302M21, C07HBa0308B02, LE_HBa0324D15, LE_HBa0330A05, LE_HBa0334J11
| Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
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Conflicted matches
None
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| Marker matches - BLAST |
| Marker matches - manual |
| Physical map (from marker matches) |
| FISH map |
| FISH images |
| SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
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| 1023-06 1 | Composite | Fluorescence | Phase | 7.2% |
| 1023-11 1 | Composite | Fluorescence | Phase | 1.9% |
| 1023-14 1 | Composite | Fluorescence | Phase | 6.4% |
| 1023-15 1 | Composite | Fluorescence | Phase | 6.1% |
| 1023-17 1 | Composite | Fluorescence | Phase | 7.3% |
| 1023-19a 1 | Composite | Fluorescence | Phase | 6.8% |
| 1023-19b 1 | Composite | Fluorescence | Phase | 4.5% |
| 1023-23 1 | Composite | Fluorescence | Phase | 5.3% |
| 1023-26 1 | Composite | Fluorescence | Phase | 6.3% |
| 1023-27 1 | Composite | Fluorescence | Phase | 6.5% |
| 1023-28 1 | Composite | Fluorescence | Phase | 5.5% |
| 1023-36 1 | Composite | Fluorescence | Phase | 4.8% |
| 1023-37 1 | Composite | Fluorescence | Phase | 5.1% |
| 1023-40 1 | Composite | Fluorescence | Phase | 4.7% |
| Mean±sd | 5.6%±1.4% | |||
Given an estimated length of 12.7µm for chromosome 6Q and the mean percentage above, this BAC is approximately 0.7µm±0.2µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
| IL Mapping |
| Sequencing
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This clone is not assigned to any sequencing project.
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Sequencing Project
none
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HTGS phase
none
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Sequencing Status
none
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Sequencing Organization
not recorded
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Full Sequence
Sequence not available.
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End Sequences
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Warnings
none
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FTP | |
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Chromosome Assembly
this clone is not part of a chromosome assembly
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Restriction Fragments
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| Annotations
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Browse
LE_HBa0031J01 has no browsable sequence annotations
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Download
temporarily unavailable
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| User comments | [Add comment] |
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