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Clone Read LE_HBa0030B22_T7_138704

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0030B22_T7_138704
Primer
T7
ID from Seq. Facility
LE_HBa_030_B22-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
767 trimmed for vector and quality, 821 raw
Genbank Accession
DU042243
Sequence
>LE_HBa0030B22_T7_138704 (raw untrimmed)
CTTGGGACCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCACGTGTGAATAATGTTAGATATGATGAAACAAAATTTTATAAGGGAATGA
CATTCAAAAACAAGCAAGAACTGAAAAATTCATTGAAAATTGCTTACTTGAAAAAAGATTTTAGACTGAAAAAGGCAATCAATTCTCGTAATGTGTTGTG
AAATTTACAAGTAATGACGGTTTGCCATTAGAATCTATGAAAAGTACCATACGTGTGATTCAGAGCATATTACAAGCCATAATCCCCACACCACGACAAA
AGTCATAGGTAAGTACTTTGAAAATAGATTTCCCAATGGTAAAGGCCCATCCACAAGAGACATGTCAAATCAACTCCGCACATAATTGGTTGTAAGGTAA
GATATTGGAAGATTTATAAGGGCATGGAGCATGCAAAGTCTAATGTTAGGGGAACACATAAGCACGGGTATGCAGTGCTTAATGCGTACCAGTATATGCT
TGAAGTTGCAAATCCAGGACGCAAGACGACATTGTCGCTCGATGAAAATGAAAGGTTCCAGTACTTCTTTGTATCATATGCTGCTTGGATAATTGATTTT
CAAGAAATGAGAAAAGTAATAGCCGTTGATGACACATTTCTAAGAAGCAAGTATGGAGGAGTTCTGCTATCGGCGTCGGCACAAGATGCCGAGAATAATA
TATTTCTAGTGGCTTTCTGTGTCGTGGACAAGGAATGTGATGCCTTATATGAATATTTTTTTTTCAAATATGAGAAGCTTTGTAGATGATACTGATGAGT
TGTGCATTATCTCTGATGGGC
>LE_HBa0030B22_T7_138704 (trimmed for quality and cloning vector)
AGCTTCACGTGTGAATAATGTTAGATATGATGAAACAAAATTTTATAAGGGAATGACATTCAAAAACAAGCAAGAACTGAAAAATTCATTGAAAATTGCT
TACTTGAAAAAAGATTTTAGACTGAAAAAGGCAATCAATTCTCGTAATGTGTTGTGAAATTTACAAGTAATGACGGTTTGCCATTAGAATCTATGAAAAG
TACCATACGTGTGATTCAGAGCATATTACAAGCCATAATCCCCACACCACGACAAAAGTCATAGGTAAGTACTTTGAAAATAGATTTCCCAATGGTAAAG
GCCCATCCACAAGAGACATGTCAAATCAACTCCGCACATAATTGGTTGTAAGGTAAGATATTGGAAGATTTATAAGGGCATGGAGCATGCAAAGTCTAAT
GTTAGGGGAACACATAAGCACGGGTATGCAGTGCTTAATGCGTACCAGTATATGCTTGAAGTTGCAAATCCAGGACGCAAGACGACATTGTCGCTCGATG
AAAATGAAAGGTTCCAGTACTTCTTTGTATCATATGCTGCTTGGATAATTGATTTTCAAGAAATGAGAAAAGTAATAGCCGTTGATGACACATTTCTAAG
AAGCAAGTATGGAGGAGTTCTGCTATCGGCGTCGGCACAAGATGCCGAGAATAATATATTTCTAGTGGCTTTCTGTGTCGTGGACAAGGAATGTGATGCC
TTATATGAATATTTTTTTTTCAAATATGAGAAGCTTTGTAGATGATACTGATGAGTTGTGCATTATC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.955615
Expected error %
0.3863
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAD49099.1| Score 123 E Value 7e-30 Identity 49.60% Align. Length 544bp (70.93%) Frame 1
contains similarity to maize transposon MuDR (GB:M76978) [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
dbj|BAB11196.1| Score 117 E Value 3e-28 Identity 48.00% Align. Length 544bp (70.93%) Frame 1
mutator-like transposase [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0030B22
Clone
Clone name
hba-30b22
LE_HBa0030B22
P030B22
Clone type
BAC
Contamination
none
Estimated length
91,253
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found