Clone Read LE_HBa0026L22_SP6_136879

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0026L22_SP6_136879
Primer
SP6
ID from Seq. Facility
LE_HBa_026_L22-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1281 raw
Sequence
>LE_HBa0026L22_SP6_136879 (raw untrimmed)
TACTGTAGCGAAGTGTCACGATGGCGTGATATAGATGGAGCAGTCTTCATCCTCTCTCTTATGAATATAGTGGTGGTGTATGTATTATGTTAATCTGATC
TGAGATAACGTATGTNCTAGCAGATAGATCTGTGAGTGTACTGTATCGATACTTCGATTCTGTGGAGATGTTNTGTCTCACTGTATACAGGAGATTGTTA
CGCATTGATCAGTGAGNCGAGGAATATATACGTTGACAGTGACAGGCAGAGGTATAATGCCAGACGCGAGAGCCGACATGTCGACATACTGTGACTGACG
GCGCCTGCATNGCAGTGTAGCGATATGANGTCGACAGACTCCGATGCATGTGTTGNGCGTTGCGCGAGAGCACGCGACTGCTNCTGTGCTANGTGANAGT
AGACGGTGGTATGCNGAGGCTGATAGATGCGCCGGTGTTGACATGATACTTAAATAGACACGCCAGCACGCTGCGTTTNTCGNGNGCTCACAGCANGCTG
CGAGATNCGTTGATATANGNANGAGCGGCGAGGTAGTGAGGTCGGCGAGTCATCTATATATNGATAGAGACTGAAGGAGACGGACTGTAGAGTTGTAGAC
GAGGAGTNATCGCATGTGTCANGCGCGCACGACAGTACCAACTGTACGTCCNAGCGACAGACTACTGTTGGATGAAGTCGANCGTGATGAGCNTCCAGGT
CGTGGCAGAGANCACTGATGACTACCTATACGCCTGGCGTATAAGTGTTATGGCGATTGACATAGTATTTGTATACATCGTCTGTCGAATANGATGGNAT
GTCACAGACTCATCTCGTGACGATCGATAATGANTGGTGTGTAGATGATTGTATGCTGCGTACTGTATAGTCATGGAGAGTTGAAGATGATGGATGTGAT
ACAATAGATACTAGCATGATGACATCACTGTACTATGTGAGTAGAGCTCGTTGCTGCGTGGCGCCTGTANATATCGATGCGCTATACTGCTCNGTATANC
TTACAGCTTAGATCTCCTACATAGCGNCTCCGCATACGAGAGCACTGTCACGAGTGACTGTCATACTCGCTTCGTTGCGGGATGTAGTCTGCGCNCTGTN
GCTCCGCGATCGTACTACGTCGAGTCTCGTGTTGATGATTGAGCAGTACTGAAACGATGGGNGGTATGTGTAGTGTGAGCTATAGAGCTGACNTCNTGAC
ATGGAGCGATGCGCGATGAGAGTTATAGCGGTGGGTATACGATGTCGCATGTCGAGAAGACAGATGACAGCACGAGNACGA
>LE_HBa0026L22_SP6_136879 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0026L22
Clone
Clone name
hba-26l22
LE_HBa0026L22
C02HBa0026L22
P026L22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found