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Clone Read LE_HBa0025I09_SP6_135941

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0025I09_SP6_135941
Primer
SP6
ID from Seq. Facility
LE_HBa_025_I09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
548 trimmed for vector and quality, 942 raw
Genbank Accession
DU045085
Sequence
>LE_HBa0025I09_SP6_135941 (raw untrimmed)
TAAAAACCGATCATGATGTTATTGACGNCAAATTNCAGANGAAAAACCNGCCCTCTAGTAAANTATATNCGTAAGCATCTATATATATTAGTGGGACTTC
TTTATAAGAAACACTTTCTATAATATATTTTATTATTATAATTAAAAAGAATTGAAAATAAACAATAGTATCGTGAAGAAGTTTTGTCATAATACTTTCT
TAAAATCGAACTCATTTTACCGCTATTACAATAGTAATGCGATGTTACAAATGTTATTATTACATAAAATAAAAGGCCTAAGCGTGAAGCACTCTTTTAA
ATTTAATGATTATTATATATAGAGGTAAGATGTCGTGTCTATGAGAAATACTTACAAGTTGACTATTAAAAATAGATAATTGTTAACTTATGGGAAAGTA
TATCCAAAAGATTAAATCTATAGTTAATTTTGGTGTATGATAATGATATTTCTCTTGAATTATATTGACTTATCATAATTAAGTAAATTTTATGGAAAGT
TGTTGTGTCTATTCTTTTTTATTCTCATTAGTTTTATTCGAATGAATTGCATTTCATTTTCTTGTTATTGATTTATTAGTTAAACAAGGTGAAAATATAC
CAAATCAATATTAACCGATGGTTAAGTGAAATAACATATGTACTAACACCTATTATATATTGTTTGGTATAAACTAATACTAAGTCTGCACAACTCTAGA
ATAATCATGAAAACTTTATATTATTATATCGTGATACTCGATTTCAATTCTGTAAGAGATATTCAATACATNGTATGGTATGATAATAGANGAAAAAAAT
ATTCATATCTTCTGCAAACATCTTTCCATTATNGTGATACTCTATTATAAACTTATATATCCGGAAAATGATTAACCGAAATTGATTGTCATTTCAAAGA
AGTGATTGCTGGTTGCCTGCCTAATGGCCTACGAAATGGTTA
>LE_HBa0025I09_SP6_135941 (trimmed for quality and cloning vector)
AGAAACACTTTCTATAATATATTTTATTATTATAATTAAAAAGAATTGAAAATAAACAATAGTATCGTGAAGAAGTTTTGTCATAATACTTTCTTAAAAT
CGAACTCATTTTACCGCTATTACAATAGTAATGCGATGTTACAAATGTTATTATTACATAAAATAAAAGGCCTAAGCGTGAAGCACTCTTTTAAATTTAA
TGATTATTATATATAGAGGTAAGATGTCGTGTCTATGAGAAATACTTACAAGTTGACTATTAAAAATAGATAATTGTTAACTTATGGGAAAGTATATCCA
AAAGATTAAATCTATAGTTAATTTTGGTGTATGATAATGATATTTCTCTTGAATTATATTGACTTATCATAATTAAGTAAATTTTATGGAAAGTTGTTGT
GTCTATTCTTTTTTATTCTCATTAGTTTTATTCGAATGAATTGCATTTCATTTTCTTGTTATTGATTTATTAGTTAAACAAGGTGAAAATATACCAAATC
AATATTAACCGATGGTTAAGTGAAATAACATATGTACTAACACCTATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.885147
Expected error %
0.2157
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0025I09
Clone
Clone name
hba-25i9
LE_HBa0025I09
C02HBa0025I09
P025I09
Clone type
BAC
Contamination
none
Estimated length
94,652
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found