Clone Read LE_HBa0167P17_SP6_13424

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0167P17_SP6_13424
Primer
SP6
ID from Seq. Facility
LE_HBa_167_P17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
598 trimmed for vector and quality, 822 raw
Genbank Accession
DU032025
Sequence
>LE_HBa0167P17_SP6_13424 (raw untrimmed)
ATATTGGCTTTTTGCTTCTAATGGTAGGAATTTCACTTATAAATCAGATTGGTCATCTGATTTTCTCTAACCTTGTTGCCCGGGAAATTAAAGACTATCT
TCTCAATTATAGCATTCTCTGTTCTATTCATCTTAATGACAGTATTTCCTATAGAGTATGATCACTAAAGCCTGTGAGTTTCCAGATTTGATAGTATTAT
GATATAGATGGACATATTGTTTTTCTCTATGATATTTCATGTGAGAGAGTTCAATTTGTGCATCAAGAATAGGGAAGTGGAAATTATGCACATCTTTTTT
ATTTTCGACCATATGATATGTTTGAATTTTGTATTTTGGTAAATTAGTGTATGCAAACAATGGACAATTTAACAATGGCAAATGCTACCACTTCTAAAGA
TGGTACGCCATTTTTTTGAATCAGACTGCAAACCATATCCTGGTCAAACTAATCGATAGAATAATGAACAGCAATGGCTTGTAACATACCTAATGAGACC
TGAGAGAATAAATTGTACACAGGCCGTAAAGAGATGGAGAAGTTGATTCTGAAAAATCCAGAGATGGAGAAGTTGATTCTGAAAAATCCTTGACTTGAAC
GCATCAAAACTTGAGGAAAAGAAGACAATGAAAAAAGAATCACCGTAATAATTTTACAATAATTAATTATATATGACAAAGACCTACAAGTTAATAACTA
GTACAAATTTAAATATTAAGTTCATGTAATAAACAACAACAATGACATGTTAAGTTTTTTTTTGCAAAGAATTGGTTCTAAACTCTGTACCCCAAGAAGG
TCCAAATAAAATTGGAAAACTT
>LE_HBa0167P17_SP6_13424 (trimmed for quality and cloning vector)
GGTAGGAATTTCACTTATAAATCAGATTGGTCATCTGATTTTCTCTAACCTTGTTGCCCGGGAAATTAAAGACTATCTTCTCAATTATAGCATTCTCTGT
TCTATTCATCTTAATGACAGTATTTCCTATAGAGTATGATCACTAAAGCCTGTGAGTTTCCAGATTTGATAGTATTATGATATAGATGGACATATTGTTT
TTCTCTATGATATTTCATGTGAGAGAGTTCAATTTGTGCATCAAGAATAGGGAAGTGGAAATTATGCACATCTTTTTTATTTTCGACCATATGATATGTT
TGAATTTTGTATTTTGGTAAATTAGTGTATGCAAACAATGGACAATTTAACAATGGCAAATGCTACCACTTCTAAAGATGGTACGCCATTTTTTTGAATC
AGACTGCAAACCATATCCTGGTCAAACTAATCGATAGAATAATGAACAGCAATGGCTTGTAACATACCTAATGAGACCTGAGAGAATAAATTGTACACAG
GCCGTAAAGAGATGGAGAAGTTGATTCTGAAAAATCCAGAGATGGAGAAGTTGATTCTGAAAAATCCTTGACTTGAACGCATCAAAACTTGAGGAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.937107
Expected error %
0.107698
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0167P17
Clone
Clone name
hba-167p17
LE_HBa0167P17
C02HBa0167P17
P167P17
Clone type
BAC
Contamination
none
Estimated length
101,005
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found