Clone Read LE_HBa0004L23_T7_1341

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0004L23_T7_1341
Primer
T7
ID from Seq. Facility
LE_Hba_004_L23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
818 trimmed for vector and quality, 1103 raw
Genbank Accession
DU021671
Sequence
>LE_HBa0004L23_T7_1341 (raw untrimmed)
CTAACTGGGTACCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCAACAACAGTTTAACGTCTGCAACCTTTTGCAGACGTTTGGTACATTC
GTTTCATAAAATTTATATTCTATTTTTCAACAAACCACGAGCTTCAACAAACTGTTGGAAATCAAAGATGCCAATGAAGATTTATTAGGATGGTGGAGTA
GGTGAAGCGATGCATTTCCATCTTTGAGCAAAATGGTTCGTGATGTTCTAGCTATTCAAGCTTCATCAGTTGCATCAGAGACTGCTTTCAGTGCGGCAAG
GTTTCAAATTGGTGATCATAGACATTCATTGGCGGAAGACAGTTTGGAAACAACAGTTTTATTTAGAGACTGGTGCAATGCTGAAAGAAGGAATAACAAT
TTGCCAAAGTTAAGTAAAAAACAAGCAAGTTGGAGCAAAACACAAATTGAATGCAATGATGATGAATTAGAGGCACAAGAATTTCTAGCAAGTTTGCCAA
CACCGGAGGATATCACCATCGATATGATGCGACAATTAGAATTAAATTTTAATGGAGAAAACAAATATTTTTAGATTACATTCGAAAACTAATTGAAACA
GAACCCTTCCTAGAAGGTGGCTGCGTAAAATTAGTTACTCATCTAATATCTGTAACAAATATTAGTTTTACGTATGAGAACTTATTGAAATAGAACCCTT
CCTAGAAGGTGGCTGCGTAGATTAATTACTCCACTAATATTTGTTCATTGTAACTTCTAAGTTTTATTGAATAAATTTGAAGGTTTTAACTTTTGTTCAA
GTTTTTTTTATACAATTATTGTTTTGCATTTTAATTTTAATATATACAATTAAATATATACTTAAGTACTAAACTAACTTTAAATACTTAATTTAAAGTT
TACAATTTACTTTACTTTTAAATTATTTTAATTTCAAATTTTAAACTTTCTCAATTTTTAAATTTAAAAACTTTTAAGTTTAAAACTTAAATTTTAAAAC
ATAAATCTTGAAAATTTAAAAATTGAAACTTTAAATTTGAAAATTTATGTTTGATTTTTTAAAATTCAAAAATTAATTTTAAAATTTTTTACCTAAAAAA
TTT
>LE_HBa0004L23_T7_1341 (trimmed for quality and cloning vector)
AGCTTCAACAACAGTTTAACGTCTGCAACCTTTTGCAGACGTTTGGTACATTCGTTTCATAAAATTTATATTCTATTTTTCAACAAACCACGAGCTTCAA
CAAACTGTTGGAAATCAAAGATGCCAATGAAGATTTATTAGGATGGTGGAGTAGGTGAAGCGATGCATTTCCATCTTTGAGCAAAATGGTTCGTGATGTT
CTAGCTATTCAAGCTTCATCAGTTGCATCAGAGACTGCTTTCAGTGCGGCAAGGTTTCAAATTGGTGATCATAGACATTCATTGGCGGAAGACAGTTTGG
AAACAACAGTTTTATTTAGAGACTGGTGCAATGCTGAAAGAAGGAATAACAATTTGCCAAAGTTAAGTAAAAAACAAGCAAGTTGGAGCAAAACACAAAT
TGAATGCAATGATGATGAATTAGAGGCACAAGAATTTCTAGCAAGTTTGCCAACACCGGAGGATATCACCATCGATATGATGCGACAATTAGAATTAAAT
TTTAATGGAGAAAACAAATATTTTTAGATTACATTCGAAAACTAATTGAAACAGAACCCTTCCTAGAAGGTGGCTGCGTAAAATTAGTTACTCATCTAAT
ATCTGTAACAAATATTAGTTTTACGTATGAGAACTTATTGAAATAGAACCCTTCCTAGAAGGTGGCTGCGTAGATTAATTACTCCACTAATATTTGTTCA
TTGTAACTTCTAAGTTTTATTGAATAAATTTGAAGGTTTTAACTTTTGTTCAAGTTTTTTTTATACAATTATTGTTTTGCATTTTAATTTTAATATATAC
AATTAAATATATACTTAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.942093
Expected error %
0.677285
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT39288.1| Score 129 E Value 9e-29 Identity 17.70% Align. Length 389bp (47.56%) Frame 1
putative transposase [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0004L23
Clone
Clone name
hba-4l23
LE_HBa0004L23
C12HBa0004L23
P004L23
Clone type
BAC
Contamination
none
Estimated length
106,189
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found