Clone Read LE_HBa0004L23_SP6_1340

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0004L23_SP6_1340
Primer
SP6
ID from Seq. Facility
LE_Hba_004_L23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
625 trimmed for vector and quality, 1127 raw
Genbank Accession
Sequence
>LE_HBa0004L23_SP6_1340 (raw untrimmed)
CCATGCTTTCGGTAGACATAGATGGCTCACATGATGGAAGAGGGTAATAGATCTGAAGTGGAGGCCAAATTTGCGCATTGGGGAATATGACTAAGATTCA
TATGCTGTGAGCGTTGGGAGGGGCTGTGAGTTTATTGGTATGCGTTGGCGGAGGCAGCAAAGATGGGGAAGATTCTGGGAGCATGTTGGAGATACTTTAA
TCGACATTAGGAGGCAAACAGGGGAAGAGATATTAGGATCACCTTGGAGAGAATTTGATGGTAGAGTGGAAGCATCCAAAGAGGACATAGTTTGAGCTTT
GATAGGTGTACTGGTAGTGTGTTCGGGACTTAAAGAGTTAGACAAAGAGCCTTCTAAATTAATGGTAGGATATTACTGGTGGCGTAGGTGATTGAGTAGG
ATGAGCAGAAAAGGAGAAAGAGATGCGATAGAAGAAGATCGGAAGGGAAGCCCAAGATGTGTTAGATGGAGCATGATTTGGTGCAGGGCCAAGGATAAAT
GGCTTGTCGAATGGAAAGTTTTGTTCATCAAAGTGAATATGTCGAGCAACATAAATACGTTCCGTGGACCAATCCAAAAAAATGATACCCTAGGTGAGAT
GGACTATAGCCAAGAAATACACAAGTTCTGTTTTGGAAATCAAACTTGTGTTTTTTGTATGGTCGAACGTAATGAAAGCATAGACAACCAAAGCCCTTAA
GAAAAGAATAATCAGGTTTGGAATGATGGACTAGCTCATACCGACATAGACCATGAGTTGTGACTGAGGGAAGATGATTAATTAAAATAGCAGCATACTC
GAGTGTGTAGTGCCTAAAGCGAAAAGGAATCTAATTGTGAGCAAGAACGCTAAGGCCGATTTTAACTACTTGACGATGCTTACTTTCTACTGTGCCTTTG
TTGCTTGTGTGTATGAGGGCATGAGACTCAATTGACTATGCCAAGTTGAGTAAGCATTAGGGTACAAGTAAAAATATTGAAACCTATCTGAACTCGAACT
GTGGTGGGAACAATCTAAATTTGCCAATTGGATTTCAAAATCAAAAAAAAGAAAAAAAGCATAAAAATTAATAAAGGTTAATTGATTGTGTCAGGAAAAT
TTTTTTTTAAAAAAAGGGGTAATACCC
>LE_HBa0004L23_SP6_1340 (trimmed for quality and cloning vector)
GAAGAGGGTAATAGATCTGAAGTGGAGGCCAAATTTGCGCATTGGGGAATATGACTAAGATTCATATGCTGTGAGCGTTGGGAGGGGCTGTGAGTTTATT
GGTATGCGTTGGCGGAGGCAGCAAAGATGGGGAAGATTCTGGGAGCATGTTGGAGATACTTTAATCGACATTAGGAGGCAAACAGGGGAAGAGATATTAG
GATCACCTTGGAGAGAATTTGATGGTAGAGTGGAAGCATCCAAAGAGGACATAGTTTGAGCTTTGATAGGTGTACTGGTAGTGTGTTCGGGACTTAAAGA
GTTAGACAAAGAGCCTTCTAAATTAATGGTAGGATATTACTGGTGGCGTAGGTGATTGAGTAGGATGAGCAGAAAAGGAGAAAGAGATGCGATAGAAGAA
GATCGGAAGGGAAGCCCAAGATGTGTTAGATGGAGCATGATTTGGTGCAGGGCCAAGGATAAATGGCTTGTCGAATGGAAAGTTTTGTTCATCAAAGTGA
ATATGTCGAGCAACATAAATACGTTCCGTGGACCAATCCAAAAAAATGATACCCTAGGTGAGATGGACTATAGCCAAGAAATACACAAGTTCTGTTTTGG
AAATCAAACTTGTGTTTTTTGTATG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.949966
Expected error %
0.235903
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0004L23
Clone
Clone name
hba-4l23
LE_HBa0004L23
C12HBa0004L23
P004L23
Clone type
BAC
Contamination
none
Estimated length
106,189
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found