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Clone Read LE_HBa0023A20_SP6_134043

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0023A20_SP6_134043
Primer
SP6
ID from Seq. Facility
LE_HBa_023_A20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
599 trimmed for vector and quality, 864 raw
Genbank Accession
DU044117
Sequence
>LE_HBa0023A20_SP6_134043 (raw untrimmed)
AAAAAATTTTGGCACGGATGGTTNGGGCGAACATCTCGCCCTTTAAAAGAGTACAGTTTATGAGGAATAACTAATCTTTTTTCCTAGCTGAGGAATCTAG
CCAGTGGCACACTATTGATAATCATTCTTATCATGCTATGGAGCATGGGAAAATAATTGCATCTTAATCAACACATAGGCACCTTCTCCCTGTCCTTCAT
CTGAATATCCCGAACCACGTCCTCTTAGCAAGACAGTTGCTCCAGTTTCATTCATAATGTGATTAATATACTGATCCTGCACTTACAAAAAGCCAACCAC
CAGCACAGAAGAAAATCTCTCCAAATGGACGGAGATGTCAGAGAGAGCTCAGAACATTAGAAACTCTTGGCTTTCTATCAATAAAAATAAAGTTTAAAGG
AGCACATCAAGCATCATAATGCCAAAAGAGATAAATAAGATAATTAGCCAGGCAGGGTAGAGAATGGACTACACCCAAACTACTGGAAGAAACAATCATA
TAATTACTCAGACCATAATCTGATCAATAAAGAGAATACATGATGCCAATATCTGATCCATAACAGAGAAGTAACAGCTGAATGAACTTCCCGGTATTTA
AATTTGCCAGCAAATCACAGCATATAGGTAAAAGAAATTGATAAGGCAAATGGATAGTAAATCACAAAAAACAAAGGATTCCATTTTTATGCAGTTAATT
ATGCGAGAATTCCTAAATTGAAAATTATGTAAGGAAAATAACCCCTTAATAGGGCACAAACCAAAAATAACTTCAATTAATCAGGAAAAAATAACAAAAT
TTAGAATTAAAAAAAGCCTCCCTTTTGGGCCCACCAATGCCCCCCTATAAATAATTTTGCTGAA
>LE_HBa0023A20_SP6_134043 (trimmed for quality and cloning vector)
TTATGAGGAATAACTAATCTTTTTTCCTAGCTGAGGAATCTAGCCAGTGGCACACTATTGATAATCATTCTTATCATGCTATGGAGCATGGGAAAATAAT
TGCATCTTAATCAACACATAGGCACCTTCTCCCTGTCCTTCATCTGAATATCCCGAACCACGTCCTCTTAGCAAGACAGTTGCTCCAGTTTCATTCATAA
TGTGATTAATATACTGATCCTGCACTTACAAAAAGCCAACCACCAGCACAGAAGAAAATCTCTCCAAATGGACGGAGATGTCAGAGAGAGCTCAGAACAT
TAGAAACTCTTGGCTTTCTATCAATAAAAATAAAGTTTAAAGGAGCACATCAAGCATCATAATGCCAAAAGAGATAAATAAGATAATTAGCCAGGCAGGG
TAGAGAATGGACTACACCCAAACTACTGGAAGAAACAATCATATAATTACTCAGACCATAATCTGATCAATAAAGAGAATACATGATGCCAATATCTGAT
CCATAACAGAGAAGTAACAGCTGAATGAACTTCCCGGTATTTAAATTTGCCAGCAAATCACAGCATATAGGTAAAAGAAATTGATAAGGCAAATGGATA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.94915
Expected error %
0.2264
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0023A20
Clone
Clone name
hba-23a20
LE_HBa0023A20
C02HBa0023A20
P023A20
Clone type
BAC
Contamination
none
Estimated length
107,777
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found