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Clone Read LE_HBa0020P05_T7_133198

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0020P05_T7_133198
Primer
T7
ID from Seq. Facility
LE_HBa_020_P05-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
565 trimmed for vector and quality, 964 raw
Genbank Accession
DU048078
Sequence
>LE_HBa0020P05_T7_133198 (raw untrimmed)
GGCAACCTGGGACCCGGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTTCAAAATACTTCCAAACACCTCTTTTTTAATAAACAAAATAAT
TATTGATTGAAAAATATTTATTTCATTTTAGATATGTGGAATCCATCTATTTCATTTTAGAGTATCATGTAGCAAGAAAAACAAAATACTATAGATTTTG
TTAACAACAATAACATGGACAAAAAATTGATAATTTTTTCAATATAATAGAAATTAAAAAAAAAAAAAAGAGTATATAGGAACTAGCAACCAATATTTTC
TAAAAAAGGATTTGAGAGTTCATAGTAATCATTTTATCTCACTTTTTTTTTAATATATAATAACACTAATATGTATCTTAGTTTCTTTGTAATGTCATAA
AAATATTACAATATATCGTAATATATTTAAAGGTCATATAGCGTCATCTATAGTTGCCGCATATTTCGTTTAGACATATTAAGTATAACATGTACCTATT
GAATATTTACATTAGAATTTTTAGCTAAACTAAGTCATTATATAAAACAATTTATCAAAGTAATACGTTTTTCGAAAATTTGACAAAACTAATATAAACG
TATTTCACGGGTAACGTTTTAGGGATATTTTATTTTTAAAAACCTAACAGGATTAGGTTGATGTACGTAACTGTAAGTAACGTTTTACCCCTATAACGTT
ATTTTCAGTATGCCTTTCTTCACTAAATGTGTTGGGCGTAAAAAGTCACGGGCGATATAGGTTGTCGACTCTGACCCCTCTGATCTTCAAAAAATTCACT
ATCGCGTAAAAAGTTTCTGTGGAAATCTTTTAATCTCATATTATGAATTTCTAAAATATGTCTCTCTCTCGACTCTGGTTTATAATACGGTGTAACTCTC
GACCCAAACGCCCCTCGTTCTCCCCACTACTCGGTCCACACCTGCGTATACACACCTCAGCTCC
>LE_HBa0020P05_T7_133198 (trimmed for quality and cloning vector)
AGCTTTTTCAAAATACTTCCAAACACCTCTTTTTTAATAAACAAAATAATTATTGATTGAAAAATATTTATTTCATTTTAGATATGTGGAATCCATCTAT
TTCATTTTAGAGTATCATGTAGCAAGAAAAACAAAATACTATAGATTTTGTTAACAACAATAACATGGACAAAAAATTGATAATTTTTTCAATATAATAG
AAATTAAAAAAAAAAAAAAGAGTATATAGGAACTAGCAACCAATATTTTCTAAAAAAGGATTTGAGAGTTCATAGTAATCATTTTATCTCACTTTTTTTT
TAATATATAATAACACTAATATGTATCTTAGTTTCTTTGTAATGTCATAAAAATATTACAATATATCGTAATATATTTAAAGGTCATATAGCGTCATCTA
TAGTTGCCGCATATTTCGTTTAGACATATTAAGTATAACATGTACCTATTGAATATTTACATTAGAATTTTTAGCTAAACTAAGTCATTATATAAAACAA
TTTATCAAAGTAATACGTTTTTCGAAAATTTGACAAAACTAATATAAACGTATTTCACGGGTAAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.872867
Expected error %
0.7453
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0020P05
Clone
Clone name
hba-20p5
LE_HBa0020P05
C03HBa0020P05
P020P05
Clone type
BAC
Contamination
none
Estimated length
51,572
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found