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Clone Read LE_HBa0019J20_SP6_132171

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0019J20_SP6_132171
Primer
SP6
ID from Seq. Facility
LE_HBa_019_J20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
611 trimmed for vector and quality, 896 raw
Genbank Accession
DU049179
Sequence
>LE_HBa0019J20_SP6_132171 (raw untrimmed)
TTTTTAAATAGGACCGAANCAAATTNGCATNGACTTGTGAGATATTTTTAAACCAAATTTACCTTGTACCCACACAAATATTTGCAGTACAGACCTAGGT
GAGTAAAATCATACATGTTATGAATGTGTAATTATTTTAACTGAAACTAACCCATGTTTTACTATTAAATTTGCTGCATCGATCTAGGAAAGTAAGCATA
CTGAATCCATTCAATGCTCCTAATGCCGTCAATGTAGTTATAATGTTTTTCTATTTATATCGATGCACGTCTAAAGTTCACTATGTAATTGATCACTTTG
GACTGAATTCAATTTCAATCTGTGAATACTCTACAAGTTCTTTCAGATTGTGGAAAAAATATGAATCTCTATCATGCTTCTTATTAAAAGGAATGACTAT
CGAGCTGATGACAAAATCGTACCACTTGTTGTATGCTGTATTACTTGCAGTTGGAAGCCATTTCTTTGTATTAACTTCCATGATGCAACATATCTCTCTA
TATATATACATATAATGCTGAACTTTTATGTCTTATCTTTACAGCTTGGTTTGGAGCCTGTGACTGTTGGTAAGGCTGCTCTTGGAAATATGTTGGGTGG
GATTGGATACTTCTTTGGCCAGTCAAAGATTTCACTTCCATCAATCTCCACTGTAAGAGATCCTAGAAGTGATTCCCTGCTATTTTAGAAAACTCGCAAC
ATGTGCAATAAACCTAATGACCGTGTTTAGATATTCTATTTTTTCTCATATATGCAAGAAAATATTCTAGAAGCTCTGTGAATGAAGAACAATATCATCT
TATCTGAACCCTAACAAGTAAAAACCTTTTAAAAATTGGGCCCAAATTAAGGGAAGTATCCTCAAGTAAACTTTTCCTTTTTTTTCCCTTCCTTTG
>LE_HBa0019J20_SP6_132171 (trimmed for quality and cloning vector)
AGATATTTTTAAACCAAATTTACCTTGTACCCACACAAATATTTGCAGTACAGACCTAGGTGAGTAAAATCATACATGTTATGAATGTGTAATTATTTTA
ACTGAAACTAACCCATGTTTTACTATTAAATTTGCTGCATCGATCTAGGAAAGTAAGCATACTGAATCCATTCAATGCTCCTAATGCCGTCAATGTAGTT
ATAATGTTTTTCTATTTATATCGATGCACGTCTAAAGTTCACTATGTAATTGATCACTTTGGACTGAATTCAATTTCAATCTGTGAATACTCTACAAGTT
CTTTCAGATTGTGGAAAAAATATGAATCTCTATCATGCTTCTTATTAAAAGGAATGACTATCGAGCTGATGACAAAATCGTACCACTTGTTGTATGCTGT
ATTACTTGCAGTTGGAAGCCATTTCTTTGTATTAACTTCCATGATGCAACATATCTCTCTATATATATACATATAATGCTGAACTTTTATGTCTTATCTT
TACAGCTTGGTTTGGAGCCTGTGACTGTTGGTAAGGCTGCTCTTGGAAATATGTTGGGTGGGATTGGATACTTCTTTGGCCAGTCAAAGATTTCACTTCC
ATCAATCTCCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.946646
Expected error %
0.012
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0019J20
Clone
Clone name
hba-19j20
LE_HBa0019J20
P019J20
Clone type
BAC
Contamination
none
Estimated length
58,530
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found