Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0015O02_SP6_130071

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0015O02_SP6_130071
Primer
SP6
ID from Seq. Facility
LE_HBa_015_O02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
803 trimmed for vector and quality, 909 raw
Genbank Accession
Sequence
>LE_HBa0015O02_SP6_130071 (raw untrimmed)
TAAGGGAATGCGACATTGAAAAGGGAGAACTATCCCTTGAGCCAATCCTCGGGTATTCTGGGAACTTCCTGTATTCTTTTATTGATGATTCACTTGGTTT
TTGCTTTTGTTTGTCTTGTGAACAGTACATCTTTTTCTCTCCAGTTTTGGAAGTTCACCACCTCTTATATCTGAAAAGATTCATAATACTAAAAAAAGAT
AGATTCTGATTGACCAAATTAAGAGCTTTGATGAACAGGAAAAGACTTTTCGATTAAAAAAAATGTACAGGGAAAGACTTATTGAGGTTCCTTCATTTGT
TCCCATTTTAATTTAACCCCTTTGCTAGTGGTGAGAGCACAAAGCATGATGTGTGGGTTAGGCTCAGATCAGGGGTTCAAATCATGCCACAGAAAAGCTG
GTATTTTAGTGGTGCTGGAAGGGGGGTATTATCTACCAAGTTTTGAATTACACGCCACTGACCTCATAGATTTCTCAGTTATAACAAAATAAAAAAAGGA
AGAAGAAAATATTACTCCTGTCATAGTTTTTGAAGCATAAATGCTACTTTGTTATCTACTTCAAAATTACATTAGGCTCTCAAATTTCGTAAAAAATTCC
TATATCTGTAAAGTGCTTAACTATTCCTAAAAATACAGTATTGTTCCCATCATTTTCTTAATAGAGCGCCAGAGATGAAGTGCTTAACTATTGCTTTTTC
GTCTTTATTGTCACGTCCCGTTATTGATGAGCTATAGTTATCTGTAGGTTGATTGCAGCATTATCTAGAGATCTCCTGGAGGACTTCTTACCGTGAGTGC
TGCTTCTATCTGATTTTCTTCTTGCTTCATGCCGATGAACATTGTGTGGGATTGTTTAGCACCTTGCTTATAGTTTTCAAACAATAACATTTGGAAATAG
TATCGTCAT
>LE_HBa0015O02_SP6_130071 (trimmed for quality and cloning vector)
AGGGAGAACTATCCCTTGAGCCAATCCTCGGGTATTCTGGGAACTTCCTGTATTCTTTTATTGATGATTCACTTGGTTTTTGCTTTTGTTTGTCTTGTGA
ACAGTACATCTTTTTCTCTCCAGTTTTGGAAGTTCACCACCTCTTATATCTGAAAAGATTCATAATACTAAAAAAAGATAGATTCTGATTGACCAAATTA
AGAGCTTTGATGAACAGGAAAAGACTTTTCGATTAAAAAAAATGTACAGGGAAAGACTTATTGAGGTTCCTTCATTTGTTCCCATTTTAATTTAACCCCT
TTGCTAGTGGTGAGAGCACAAAGCATGATGTGTGGGTTAGGCTCAGATCAGGGGTTCAAATCATGCCACAGAAAAGCTGGTATTTTAGTGGTGCTGGAAG
GGGGGTATTATCTACCAAGTTTTGAATTACACGCCACTGACCTCATAGATTTCTCAGTTATAACAAAATAAAAAAAGGAAGAAGAAAATATTACTCCTGT
CATAGTTTTTGAAGCATAAATGCTACTTTGTTATCTACTTCAAAATTACATTAGGCTCTCAAATTTCGTAAAAAATTCCTATATCTGTAAAGTGCTTAAC
TATTCCTAAAAATACAGTATTGTTCCCATCATTTTCTTAATAGAGCGCCAGAGATGAAGTGCTTAACTATTGCTTTTTCGTCTTTATTGTCACGTCCCGT
TATTGATGAGCTATAGTTATCTGTAGGTTGATTGCAGCATTATCTAGAGATCTCCTGGAGGACTTCTTACCGTGAGTGCTGCTTCTATCTGATTTTCTTC
TTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.953264
Expected error %
0.1815
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0015O02
Clone
Clone name
hba-15o2
LE_HBa0015O02
P015O02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found