Clone Read LE_HBa0015I17_SP6_129813

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0015I17_SP6_129813
Primer
SP6
ID from Seq. Facility
LE_HBa_015_I17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
712 trimmed for vector and quality, 984 raw
Genbank Accession
Sequence
>LE_HBa0015I17_SP6_129813 (raw untrimmed)
TTTTTCACAAAAGGGTGGTCTAAAATAGTTATNNTCGAGGGAGAATGTTTTCAACTGCCCTTATCTGAATAACACAAAAACATGTAAGATAAACTGGAGC
CCTCTGTGAGGGTTAGAGTCAAGGAAGGAGCGCAAGGGCCAAAGGAGTGGTCTATGTAAACCTTTATTTGTGAAGGAATTTCCCCACCTACCATGCCCAC
CACCACGGCTAGTGGTCGGCTAGATAGTAGCCCTAAAAAATTGGCCCAAAATAGTTCCCTCTTTGCGATCCACTTAACAAATCATGGTGAAGACCACGAT
ACGTGGGAAGGCTCGTAGAGGGGAGTTTTGTGGTAGAGTATTAATGGGAGGTAGCTTAGACAATGCCTCAAGGTGCAATGAAGGTAGCACTACTCATAGA
TCCCGTCATGAAGATTCCTTGGACTTGTGGGATAAAGTCACTTGTTTCGTACCCAACACCTCAAGTCGACGAAGGGAACCACAACTCGTAGTCATGACCA
CGTCTCATGGGATCCCTCATTAGACCTGGCAGGTCCCTTAATGTGAAGGATGTTTTGAGTATTCAAACATAAGTGAGGTCATTTTAACTAAACTCAGGGT
TACTATATATGTAATTATTACTCAAAAACCAACCTATTCAATTTATTATTTCCAAAGCCCAAATACATTCCAAAAGTTCAACCTCTCTGAAAATTCACTC
ACTAAAAAACTCAAAGAAGATGAGAAATTCAATCTTAAATTCAAGAAGCAAAGTTTTCAACACCATATTCATGGAGTTTCTTCATAACTCCATGAATGAT
ATCTTGCATTCATGGAGTTCCTTCCCAACTCATTTTTAAAAGAAAAATTGAAATCCCCCATTGGTTAGGGTTGGATGTAAAAGTGATGAATTCCTTTAAA
TTTGATTCTATTGGTTGAATTATGTTATTTAAGCCATGAATTCTTGAGTTCATTTTGGTTTTTTTATTATTCCCCCAAAACCCA
>LE_HBa0015I17_SP6_129813 (trimmed for quality and cloning vector)
GAGGGAGAATGTTTTCAACTGCCCTTATCTGAATAACACAAAAACATGTAAGATAAACTGGAGCCCTCTGTGAGGGTTAGAGTCAAGGAAGGAGCGCAAG
GGCCAAAGGAGTGGTCTATGTAAACCTTTATTTGTGAAGGAATTTCCCCACCTACCATGCCCACCACCACGGCTAGTGGTCGGCTAGATAGTAGCCCTAA
AAAATTGGCCCAAAATAGTTCCCTCTTTGCGATCCACTTAACAAATCATGGTGAAGACCACGATACGTGGGAAGGCTCGTAGAGGGGAGTTTTGTGGTAG
AGTATTAATGGGAGGTAGCTTAGACAATGCCTCAAGGTGCAATGAAGGTAGCACTACTCATAGATCCCGTCATGAAGATTCCTTGGACTTGTGGGATAAA
GTCACTTGTTTCGTACCCAACACCTCAAGTCGACGAAGGGAACCACAACTCGTAGTCATGACCACGTCTCATGGGATCCCTCATTAGACCTGGCAGGTCC
CTTAATGTGAAGGATGTTTTGAGTATTCAAACATAAGTGAGGTCATTTTAACTAAACTCAGGGTTACTATATATGTAATTATTACTCAAAAACCAACCTA
TTCAATTTATTATTTCCAAAGCCCAAATACATTCCAAAAGTTCAACCTCTCTGAAAATTCACTCACTAAAAAACTCAAAGAAGATGAGAAATTCAATCTT
AAATTCAAGAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.977514
Expected error %
0.3458
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0015I17
Clone
Clone name
hba-15i17
LE_HBa0015I17
P015I17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found