Clone Read LE_HBa0168N23_T7_123973

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0168N23_T7_123973
Primer
T7
ID from Seq. Facility
LE_HBa_168_N23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
11 trimmed for vector and quality, 718 raw
Sequence
>LE_HBa0168N23_T7_123973 (raw untrimmed)
CCCCTTTTTAATGTGTTCGATTACAACGTGGAAGTNNCNAAATANTACATTGGCCCCCCCTAAAGGTTCTATATCCACCCGTTTTTGCNCCTCCAAGGAA
ATTTATTCATGAACNTNGCTTAATCACACACCAACNCCTAAANTGNNGCTGGGNAGAGTTACTTCCCCCNNNATTNGATNTGTNNNCNNAAGGNCCCTCN
NACNNTTNNAATCNNATCCCNNCNNTNNNNGGNNGNNNANGGTGGTGACNTTGGGGNTGCTNNNANNGCNNACTCNNNCNGGGGTGATNACNNCTNNANN
CTGNACCNTNTNATNCCATGGTTNCCCANGTGNNNANNNATNNNANNNNNNTTNTANNNNNNNNANNNNNNNNNNTNNTCCNNNNANNNNTNNNNNNNNN
NNNNNNNNNNTNTNNNNNNNNNNNNNNNNNNNNNNNANNNNNTTCCCNNNNNNNNNNTNNNNNNNNNNNTCNNNNTCCNNNNNNNNNNNNTNNTTNNNNN
NNNNNNNNNNNNNAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNTANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNTNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTNNNNNNNNN
>LE_HBa0168N23_T7_123973 (trimmed for quality and cloning vector)
AGAGTTACTTC

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
4.6305
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0168N23
Clone
Clone name
hba-168n23
LE_HBa0168N23
C02HBa0168N23
P168N23
Clone type
BAC
Contamination
none
Estimated length
112,452
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found