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Clone Read LE_HBa0142D04_SP6_122561

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0142D04_SP6_122561
Primer
SP6
ID from Seq. Facility
LE_HBa_142_D04-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1119 raw
Sequence
>LE_HBa0142D04_SP6_122561 (raw untrimmed)
TAAACAGGCTTTTGAAAGATAGACTAAGAGCGACGAGGCGANCGATAANGACGAATAATACACGAGGCAAGGTAANGTNCAACGGGCCTNGAGCAATCCG
ATTTAAAGAGAGCCNGANNAGGNNTANGANANGNNAANNNGGAANGAGAGGGAGCCCTAAAGAAGAAGGANNAAGAAANGANNGAGNNNGNNGAAAAGAN
NNNAGNNAGGAANNGAAGNNAGGAGNNNGAAGAANGGGAGGAAAGGAGGAGNNATTTGAGAGAGGGAAGAANNNGAGNNNGNGAGGNNNAAGAGNNGGAA
NAAGAGAGAGAGAAGGAGGGGAGGAAGAANNANANNNNNGGAGANANNNNGAGNNAANNGAGGNNAGAGGGAGAAAGGAAGAANNNANNGGGGGGAGAAG
NNAGGANGAGAGGGAAGAAGAAAGAGAGAGGGAAAAGGAAGGAANAAAGNNGGAGAGAGAGAGAGAGGGAGAGGNNANGAANGGAAGAANNGANGGNNNG
AGAGGAGAGAAAAGAAGGGAAGAGGGGGNNNNGAAAAANAAGAAAAGGAAAAGGAGAAANAGAAAGAAGAAGAAGAGANAGGGGGAGGAGGAGGNAGGGG
AGAGAGGGAGANGAGGAGAAAGGAANGGANANGAGAAGGAGAGGAGAGGAAAAGAAAANGAGAGAAGGAGNAGAGGGGGAGAGAAGGGAGGAGAGAGGGG
NAGANANGGAANNAGGAAGGAAGGGAGGAAGAAAANGGNGGAAAAGAANAAGAGGAAAAAGGGAGGAAGAAAAGNGAGAAANGAGAAAGAGAAGAAAGAA
NAAGAGGAGAGAGGAAGNGANGAAAGAANGAAAGAAGAGAGGAAGAAAGAAAANNGAAGAAAANNAAAAGAAGAAAGANNAAANGANGAAAGGAAGANNN
NAGAGGGAGAGAAGNAAAAGAAGAAGAAAAAAGAAAGAAANNGAGANNGAAGNAAAAGAAGAAGANGAGGANNAAGAAANGANGGAAGAGAAGAGANAGA
AAAAAGAANGAAGAAGANANGAAGGGAAGNAGAAAGANGGAGNAANNGGAAANGAANANAGGAGGAAGAGGGNNAAGGAAAGGGGAGAGAANGAGGGAGN
NAAANGGNGAGAGANGAGG
>LE_HBa0142D04_SP6_122561 (trimmed for quality and cloning vector)
AAAG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.1909
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0142D04
Clone
Clone name
hba-142d4
LE_HBa0142D04
P142D04
Clone type
BAC
Contamination
none
Estimated length
85,067
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found