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Clone Read LE_HBa0050P21_SP6_11128

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0050P21_SP6_11128
Primer
SP6
ID from Seq. Facility
LE_HBa_050_P21-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
642 trimmed for vector and quality, 787 raw
Genbank Accession
DU030040
Sequence
>LE_HBa0050P21_SP6_11128 (raw untrimmed)
CATTTACCACAATATATCTGCAAGCTTCGCGAGAAGTCTATACAATGAGTGATGTGGGTCTTATCCTGTCGATCATAATGCCACTAAAATAAATGTCTGC
GCCCAAATTTTTAGGGTATATATATATATACACACATATATATTATCTTAAAAAGCATGGACTCCTAATATAAATGTTAAATTAGTATAATATTTCTAAC
TTAGGCTGTTACTTTTTTGATGAGTTGTGATTTGTCTGATAAGTTGTCATTTTTTTTTAAGGGTTGTGATTTTTCGATGAGTTGTGATTTTTTCAAAGAA
TTGTGACTTTTTCAATAAGTTGTGACTGTTCAAAAGGTCATGACATTTCCGATAAGACACATAAAATACTTGTTCATACCACCCTTTGTTCACTATGAAT
ATAGGGGCTTCCTCTTATTTTTTCCAAACACAGTTTTTTTTAATCTTCTAATCTTCTTCTTCTTGCATTCGAAAGATTTCGTGTGACTTATTGTCGTTGA
GTGAGTTTAAATTAGATTGTAAGTGATGCCGAGTTGTGAAGGGAAAGAAATATTTCTTTTTGGTGAAAACAGAAAATGTACATTTTTATCGGTATATTAC
TTGTGTTATTAGTTGTACGACAGCTTGGTGCTGCCTTTTTTTGCAATAATTTTATCATATCAAAATTAAAATTATTGCTAATAGTAGTCCATTTGTAACT
TACTAAGTGCATGATTGTGGTGTTACCTCTCCTTGATGATATTCTTCAATGTTCTACCAACAATAGGAGGATTAAGAAAAAAAAGGA
>LE_HBa0050P21_SP6_11128 (trimmed for quality and cloning vector)
GTCTTATCCTGTCGATCATAATGCCACTAAAATAAATGTCTGCGCCCAAATTTTTAGGGTATATATATATATACACACATATATATTATCTTAAAAAGCA
TGGACTCCTAATATAAATGTTAAATTAGTATAATATTTCTAACTTAGGCTGTTACTTTTTTGATGAGTTGTGATTTGTCTGATAAGTTGTCATTTTTTTT
TAAGGGTTGTGATTTTTCGATGAGTTGTGATTTTTTCAAAGAATTGTGACTTTTTCAATAAGTTGTGACTGTTCAAAAGGTCATGACATTTCCGATAAGA
CACATAAAATACTTGTTCATACCACCCTTTGTTCACTATGAATATAGGGGCTTCCTCTTATTTTTTCCAAACACAGTTTTTTTTAATCTTCTAATCTTCT
TCTTCTTGCATTCGAAAGATTTCGTGTGACTTATTGTCGTTGAGTGAGTTTAAATTAGATTGTAAGTGATGCCGAGTTGTGAAGGGAAAGAAATATTTCT
TTTTGGTGAAAACAGAAAATGTACATTTTTATCGGTATATTACTTGTGTTATTAGTTGTACGACAGCTTGGTGCTGCCTTTTTTTGCAATAATTTTATCA
TATCAAAATTAAAATTATTGCTAATAGTAGTCCATTTGTAAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.924559
Expected error %
0.0393433
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0050P21
Clone
Clone name
hba-50p21
LE_HBa0050P21
C08HBa0050P21
P050P21
Clone type
BAC
Contamination
none
Estimated length
109,542
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found