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Clone Read LE_HBa0190C17_SP6_107264

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0190C17_SP6_107264
Primer
SP6
ID from Seq. Facility
LE_HBa_190_C17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1348 raw
Sequence
>LE_HBa0190C17_SP6_107264 (raw untrimmed)
NGTCGGCTAGGGCTATATTTCGTGAGCACATAGAATGTGCCTGTCTTTCGAGTTCGTCTGCGAACTTCGTGCTACGCTTGTATCAGTGCGCGAGGGNGTG
CGTGTGAGTGTATTGCTCCCCCCTTCTTAGTATGAGATAATTGCCTAGAAGCTGCGTATCCAACGTTGTGATTCGTGGAATCCCCTTCCTTAAGGAGGAA
CTTCCACTGTGAATTTGCCTTGTAGGTGCTATGCTCGCTAAATGAGGTATAGTAAGTGGTGTTCGTAGAGGTGCGTTGCTCACGACAGCGCGTCACTTCA
GAGAGACTTATATACACCGCATTCCCTCCGCCGCTGTCTGAGCTAGCACTGGAAATGCATCGTGCCCTGTAATCNCGCCTGGTCTGCTGACAGGTGATGC
TGGGCTGCTGTCCCTACCATGAATTGAGCGCCACCACGAACTCGTCTTATAACGTCTCGGCTAGACAATGAGGCGCATTTGGGTGCTGTTAGTGTCGATG
CATATTTGTGCGTGGTGGGGCTCTGACTAATATGTCTGNCACATGCTAGATAGTTGCGTATCAGAGACTTTACTAATCCCTCACCGCAGCTCTTCTAGTT
GAGAGAAGTCTGGGAACGGAGGAGGTGATAGTGTCACCGACTATGCCTTGGCCATCGTGCTTCTTGGAGGCGCGCGGGCTCTGCGGTCGGTGATGAAGCT
AATACGACATCTGACGTTCTAGAGCGTAGTGATGAATGGGACTCTCGTGCGCACGTAAGCGTCATTGTCTCTGGCGACTCTCTTCTGCTAGTGAAAGAGA
CGAGAGGCTTAAATGCATGACTTGGTATCTGTGCGTGTGCGTATGAAGTCGTGCCACGACTTGCGACCAATCGCAGCAGAGTCAACNGGGGAGGGTCTTC
TGCCGATTTTACGCGAGGTGACTTCTATATGAAGTGATAATGTCATGACGAGATGTGTATCTATACTACTTAACGCTTGATGACTAACATCCAACGTGAG
AGGCTGACAGGCTGCGCGCACCAGATGTGCACTGACACTTAATCAATGAGACACGGCNCTGACGCGTACACTCACTAAAGCGATACACGCAAGACGATCT
CCCTGTGCTAACCGCTAACACATCCATGACACGACTAGAACGATAATCGTCTGCTGTGAGTGTCGGGCGAGAACTGAGACTGAANGCAGGAGATCTAGTT
ACCATTCATGTGGTGGTATGCCACGTGGCNTGCTGTTAGCATCTGTGTCTGGTAGCCACGCCGGCGTGNACGGGATCATGCGGTGTGCGAAGAGGGATGA
GCGCCGTCGAGACGTGAGACATGCGTGCTGATGATGGAATGACAAGCN
>LE_HBa0190C17_SP6_107264 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.10793
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0190C17
Clone
Clone name
hba-190c17
LE_HBa0190C17
P190C17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found