Clone Read LE_HBa0173J02_T7_105267

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0173J02_T7_105267
Primer
T7
ID from Seq. Facility
LE_HBa_173_J02-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
659 trimmed for vector and quality, 726 raw
Sequence
>LE_HBa0173J02_T7_105267 (raw untrimmed)
AACCTGGTACCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGATCTCAGGGCAGGTCATTCCCTTTGTTAGAATAGCATAAGGTGATGAAC
CAGACTATGTGTGTAACTAGAAATGGTCCGTATAAGTTCCTTGTCATTCCATTAGGGCTAACAAGGCTCCGGCTATGTTTTCCAATTTAATGAATGATGT
ATTGTTTGACTATCTTGATGATTTTGTGGTTGTCTATCTAGATGATATTGTTATCTATAGTCGAACATTGGAGGAACATGTTAATCACTTAAGTTTGGTT
CTGTCTTAGTTAAGAAAATACACACTTTATGTTAAGATGGAAAAGTGTGAATTTTCACAACAAGAGATAAAAATTTTGGGGCATCTTGTTAGTAAAAACC
AAGTTCAAATGGGTCCTAAGAAAGTGCAGGCCATTGTTGATTGGAAGACACCTCATCATGTTAAGGATTTGAGATCGTTTCTTGGGTTGGCTAACTATTA
CAGGAAATTCATTGCTGGTTATTCGAAGAGGGCAACAACTTTGATAGATTTTTTTAAGAAGGATACAAAATGGGTTTGGTCTGAACGATATGGGTAAGCA
TTTCAGAATTTGAAGGAAGCTATTGCATCTGAACTAATACTCAAGTTGCCCGATTTTGTGTTGCCCTTTTAAGTGCACACCGATGCCTCTGATAAAGGTA
TTTTGTGGTGTGTTAACCATAGTAAA
>LE_HBa0173J02_T7_105267 (trimmed for quality and cloning vector)
AGCTTGATCTCAGGGCAGGTCATTCCCTTTGTTAGAATAGCATAAGGTGATGAACCAGACTATGTGTGTAACTAGAAATGGTCCGTATAAGTTCCTTGTC
ATTCCATTAGGGCTAACAAGGCTCCGGCTATGTTTTCCAATTTAATGAATGATGTATTGTTTGACTATCTTGATGATTTTGTGGTTGTCTATCTAGATGA
TATTGTTATCTATAGTCGAACATTGGAGGAACATGTTAATCACTTAAGTTTGGTTCTGTCTTAGTTAAGAAAATACACACTTTATGTTAAGATGGAAAAG
TGTGAATTTTCACAACAAGAGATAAAAATTTTGGGGCATCTTGTTAGTAAAAACCAAGTTCAAATGGGTCCTAAGAAAGTGCAGGCCATTGTTGATTGGA
AGACACCTCATCATGTTAAGGATTTGAGATCGTTTCTTGGGTTGGCTAACTATTACAGGAAATTCATTGCTGGTTATTCGAAGAGGGCAACAACTTTGAT
AGATTTTTTTAAGAAGGATACAAAATGGGTTTGGTCTGAACGATATGGGTAAGCATTTCAGAATTTGAAGGAAGCTATTGCATCTGAACTAATACTCAAG
TTGCCCGATTTTGTGTTGCCCTTTTAAGTGCACACCGATGCCTCTGATAAAGGTATTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.958022
Expected error %
0.69064
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAD13304.1| Score 237 E Value 2e-61 Identity 20.90% Align. Length 626bp (94.99%) Frame 2
polyprotein [Lycopersicon esculentum] pir||T17459 polyprotein - tomato
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAD12894.1| Score 151 E Value 2e-35 Identity 13.70% Align. Length 626bp (94.99%) Frame 2
reverse transcriptase [Brassica napus]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0173J02
Clone
Clone name
hba-173j2
LE_HBa0173J02
P173J02
Clone type
BAC
Contamination
none
Estimated length
83,536
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found