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Clone Read LE_HBa0162K04_SP6_103782

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0162K04_SP6_103782
Primer
SP6
ID from Seq. Facility
LE_HBa_162_K04-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
386 trimmed for vector and quality, 798 raw
Genbank Accession
DU093909
Sequence
>LE_HBa0162K04_SP6_103782 (raw untrimmed)
GATCCCATTCCGTTACTTCATTTATTTAATAATGTATCCCCTTTTAAAGCCCCTCCANTGNACNGNANNGNANGGNAGAAACCTTTAAGGGCCACACTAT
ACTATTTATTTTTGTTTAATAACATTTTAATTGTTTGGTTTGATCGTATCGTACTGTATCGTAAATTATAAATATACTAAAATATCTTTAATTATTTAGG
GTAGGAGGTTTGACTAGATTAAAATAATTAAGATGAAGGGTAAAATAGTATTTTGAAATATTATGTAAATATATCATTAGAATAAGAAATTAAGTAACAA
TGGGAACACACCGAATTGGTTGTTCCATAAAATAGGGGTTCTCATTGCTACGTAATAACGAAATTTGACAATACAATACAATACTTTTTAAGTAACAATA
AAAAAACATTGTAGTTTTAGTAACGATACAATACAATACAATGAATAACAATAATCCAAACATAGTGTAAGTGGTACTCATTTTAGAGTTTGAATGTACA
TATAAACCATGATGAAACATCCTGCACGCAAAAATCTAGGACCACTTTGGCTCCAACAAAGAGAATTAAACACCAGGTTTTTTCCTTACAATACCTAATG
CACCTTCGTAGTCTTCCCCCATCTTACTACCTAATAATCAATGTTATCTCTACCTCAATTCTCCCAGAATATCTAAAATAATACCTGCATCCTTCGTTCT
TTTAACATTATGTTTTCATTTCTTTATATTTCTTAATACTCTATCCCTTCTTACTTCTTCTACCCTATTTCTTTCCTCTTTCCAACCCTCCCACCTCC
>LE_HBa0162K04_SP6_103782 (trimmed for quality and cloning vector)
ACTATACTATTTATTTTTGTTTAATAACATTTTAATTGTTTGGTTTGATCGTATCGTACTGTATCGTAAATTATAAATATACTAAAATATCTTTAATTAT
TTAGGGTAGGAGGTTTGACTAGATTAAAATAATTAAGATGAAGGGTAAAATAGTATTTTGAAATATTATGTAAATATATCATTAGAATAAGAAATTAAGT
AACAATGGGAACACACCGAATTGGTTGTTCCATAAAATAGGGGTTCTCATTGCTACGTAATAACGAAATTTGACAATACAATACAATACTTTTTAAGTAA
CAATAAAAAAACATTGTAGTTTTAGTAACGATACAATACAATACAATGAATAACAATAATCCAAACATAGTGTAAGTGGTACTCAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.874186
Expected error %
0.536975
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0162K04
Clone
Clone name
hba-162k4
LE_HBa0162K04
P162K04
Clone type
BAC
Contamination
none
Estimated length
111,669
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found