Clone Read LE_HBa0162K01_SP6_103776

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0162K01_SP6_103776
Primer
SP6
ID from Seq. Facility
LE_HBa_162_K01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
474 trimmed for vector and quality, 795 raw
Genbank Accession
Sequence
>LE_HBa0162K01_SP6_103776 (raw untrimmed)
GGCCCGGTTTTCTTATAAGAAATACACGTACCTTGGCCCTACTCAACACATGAATAACTTCACTTAATATAAAGCAGTGAAAACATTTAGTTTGTTAAAA
AAAATAAAAGAACAAACTCAAATTTAATTATATGTAATAAATGGAATTTTTGTGGGAGATTTTCTAACCGACAACCATCACTATGAGCCTTATTGGTGAT
ACACCGTCTTGCCCATGCTACAAGAAGTGTCTTATACTTTGATGATGCATAAAACTACTTAACTTAGTGGATATACTAGCTTAACTTACATGATCATCTA
AAAAGTATGAACCGTTAGTACCCATGATGGCTACATGGTTTGCTTGGACACTTGAGTTAAAATGATTTCTCATCCACAAACCAATTCCTCCCATCTGACA
GTCGTTGTCAAACGCTTCAATTCACTTCAATGTTTTTTACAATTATTACTCCTACCACCGACTAGATTACATTTATAACTTCATATATGAATTCTAATTT
GTACCTTTGCCTCTGGGTTTTACAACTAAACATCAATGGGTTTGATACTAGATAACGATCCCTTCACCCTATATTCAACTAACGTGCTATTAAGCATTCA
TCTCTTCCTTAACTTTGATTAGATGTTAATCTTTTTGTCCTTTCTGTATTTTCTGGTCTATTCTAATCTCTCTTTATTATACTTATCTCGGAACTTCCAT
CCCTTCAAGCTTTCCTTCGTCTTTATATGTTCCTAGTTTCTTTGGCTGCTCCGCTTCCCTCTTGACTTCTTGTCATGTTCTCCTTCTCCGCCTTT
>LE_HBa0162K01_SP6_103776 (trimmed for quality and cloning vector)
ACCTTGGCCCTACTCAACACATGAATAACTTCACTTAATATAAAGCAGTGAAAACATTTAGTTTGTTAAAAAAAATAAAAGAACAAACTCAAATTTAATT
ATATGTAATAAATGGAATTTTTGTGGGAGATTTTCTAACCGACAACCATCACTATGAGCCTTATTGGTGATACACCGTCTTGCCCATGCTACAAGAAGTG
TCTTATACTTTGATGATGCATAAAACTACTTAACTTAGTGGATATACTAGCTTAACTTACATGATCATCTAAAAAGTATGAACCGTTAGTACCCATGATG
GCTACATGGTTTGCTTGGACACTTGAGTTAAAATGATTTCTCATCCACAAACCAATTCCTCCCATCTGACAGTCGTTGTCAAACGCTTCAATTCACTTCA
ATGTTTTTTACAATTATTACTCCTACCACCGACTAGATTACATTTATAACTTCATATATGAATTCTAATTTGTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.929719
Expected error %
0.58716
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0162K01
Clone
Clone name
hba-162k1
LE_HBa0162K01
C02HBa0162K01
P162K01
Clone type
BAC
Contamination
none
Estimated length
86,654
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found