Clone Read LE_HBa0162E23_T7_103533

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0162E23_T7_103533
Primer
T7
ID from Seq. Facility
LE_HBa_162_E23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1220 raw
Sequence
>LE_HBa0162E23_T7_103533 (raw untrimmed)
TTTTATATTTATTAACTTTCTACTGTGTTAGTGGTATCAAGTAGTAAATGAGCGGAGGTCTGTAGTTGTTAGTGTTATGTGAGGGCTTTGATTGTAGAGA
ATATTCGTGCATTTCGCTACCCCTTTCCATGTGACGAACGTTTTCAGAGCTGCGTGAAAGTATCGACTAGTAGTGAATCCCCTTTTCCTTTGGCACCAGA
CGTTGTCTTCTTTGTCGCACGTCGCTGTCCGATTCTTACTATCGGATCGCCCGACACGAAAAAAGAGCAGTTGTTTGCTTTGCTTTTTTTGTCGTGGTTT
GTCATCTCTTATGATTGTTAACGTCAAGTTGACGAGGGGGAAGGGGAGAGGCTGAGGAGAATCGGGCCGGGGCGCGCGTGTGTTAACGGACGAAGAGCGG
GTGGCTGTCACGCGAACACAATGGAAACGTCTNGATCATAGAGTGCATAGGTCGAATTCGCTCGTGTCGCGATTGAGGTGCTGTCGTACACGCGGCTGGA
GAGCGGCGAGGAGGGAGGGATNGTTCGAGGGAACGTGAGGGTAGCTGATGGGAGGAAAGTCACAAGTCGGTAGTAAGATGGGGCNGGCAAGATATGCCAC
TGGTGGTGTGAGTGTGTGTTGTCGCGCCGATGATCCTTTGAGTGACTCTGTGATGCCTCCAGCGTTGAAAGACGCAGAGCGTGGCGGTAAACCTGGGCCG
AAGCCNCTGGTGTATCTATGGCCCGGTGCTTGACGTGTGGTGGAGTAGCGGGTATGTAGTTTACGCGCTACTACGACTGTAANGATGACGTGCCAGTGAT
TTCGAGCCGACATGTTGGGGTGAGGACCGAGCTGCCGCGTCGGGCAGCGATCGTGGACCAACGTCCGGGGCCCCGCGCGGCGTGTCGATGAGGGGCTTGC
GTGGGCGGCTGACGTGGTGGATCATCGTACGGCGTCTGACTGCAACGTGGGAGACCGGCAGTACGGGCCTGCCCGTGCTCGAGTGGCGCAGTGTCGGTGT
GCTGCTCCTCATGCTCTACTTGCATGTTGGTTTCATCACTCCGCAAATTTCTGGGTATTCGCTATCTGTGGATGATGAGGGTCGTGTGCCGACTCGCTTG
ATGCGGTTGCTCAATTAACCTGTTGCGTGTATTTTGATGCGTGGTGAAGCGTGTTACCTTGCCTTTGACACGTACCCTGCATCATCCGCGATCTGAATAT
GCAATGTATTGCGACATATG
>LE_HBa0162E23_T7_103533 (trimmed for quality and cloning vector)
TG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.65311
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0162E23
Clone
Clone name
hba-162e23
LE_HBa0162E23
P162E23
Clone type
BAC
Contamination
none
Estimated length
68,142
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found