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Clone Read LE_HBa0158K23_T7_103053

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0158K23_T7_103053
Primer
T7
ID from Seq. Facility
LE_HBa_158_K23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1183 raw
Sequence
>LE_HBa0158K23_T7_103053 (raw untrimmed)
CTCTCATTAACTGACACAATGGGGCCCCCGGGGGGAAACCTTCCAAGACTTCGGACCTTGACACGGGACTGTGAAGTCTAACTTTNCTCACAGTGACGAG
ACCTAAACGCACCCTCTTAAAGGAGTGCACAGGATGATAGAACGATACCCAACACGACAGCGCGGACGCTCTTTTATAGGAGAGAGAATGTGCAAATTTN
AGCGGTTCTTTATCATCCAAGTAACTAGTCAAGCTGTGTGAGAGTAGTGAGAGAACCGATCGACGTGCCAACGGCCACATGCGTGAGAAACAACGCTGCG
CGACCGCAGGAAATAACTTACAATAAGAGATGTGACCCGGGGACTAGACTAACCATACCATGGGCACAACCCACCCGGAAACACAACCACAACGACTGAT
TGACTATCCCCTCGACTCGCACCCGACCAACGCATCTGCACATCAAGGGAACATGAAGCAGGGACAGGATCATGACACGGACTGCGTCAAACCGCGAGAG
CGTCCCGGGCCGCCNCGAAGNCGACACGGAGTGGCTCTCAGCAGTGGACATGGACAAAAAGAAAACCAAAAAGCCACAGTTGAGACGCTCACCACACAGA
TACCAACACCATTCATCCGCCCACACCATCTCGGTCAATNCNCGGCAACCTGCGAGCTTGTTTATTTTTCTATAAGCGCACCATCACTAACAGAGCATAC
TAGAAACCCCACTCCTACAACATAAACAAAATTAACGGTACGAGACAAATGGATCACAAAGCTCCCAGAATCTGACATTCTGATAGCAGCGCTTTTATAC
ACCACTACTTCCACACACAATCTATCTCTGAAGATATCACGTCCACCTAACTAGACAGAAGCCACTCTCGAATAGTAACACTAGATATCACAACTACACA
CGGTAATTGCATCCCATCAAGGACTGCGATAATTAATACCCTTATAGAGTTATCTTACCCACTTCCGGGAGACACGCCTCCGCTAGAAATGAGTCCACCC
CACCGCACAGTGCTTCAAACTCTAGACACAACACTCACACATATAAGTAGAGTTGCAGACGACCTAATCACCGAGCTTCACACCCTCNCAAGAACACATC
CCTGGTCGACCACATCGCGCAGCTAGTTTCTAACAAATGCACTATATACCTACCCAAACACCTCCCTACACCTGTATACGTCC
>LE_HBa0158K23_T7_103053 (trimmed for quality and cloning vector)
ATC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.17142
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0158K23
Clone
Clone name
hba-158k23
LE_HBa0158K23
C02HBa0158K23
P158K23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found