Clone Read LE_HBa0158J05_SP6_102968

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0158J05_SP6_102968
Primer
SP6
ID from Seq. Facility
LE_HBa_158_J05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
727 trimmed for vector and quality, 922 raw
Genbank Accession
Sequence
>LE_HBa0158J05_SP6_102968 (raw untrimmed)
ACGAGCTTTTATTAGAGATTTACTATACTAAACTAACCTCGTTAATGATGCTTTCAAACTCTATATTTGACTACCATTTCTACTTTATGTAATTATTTAA
TACTAAAGGTAGTACCATAATAAAAAGTAATGAAACTCTGGTAAAATGGACAAGTAAAATGGAACGGAGGGAGTATATTACGTGTACTTAATGATCAACA
AGTTCACCAATGGAAACCAAGAGAACAACACAGATCAAAGCAACAACCTCTACAAAAAAAAATTATTATAAATAGCCTGTGCACACATTACATATGGGGT
AACCAGAAAGCAAGAAGTGGGAGAAAACATCCTGCCACTGTCTAAAAAGTTATCAAACAGACAAATCAAATTTTCCTACCTTCTCTTTTCATCTCTGAAT
CACCCAACCACAAACCTATCAACAAAGTTAGCATTGTCATAATCCCCTCAACATGGTATCAGTCAGCCTTCCAATTCATACGAACTGAAAAAAGTAGAGC
TCGACTTTGAACAACTGTCGCATCAGGTTTTGTTCTATACCAATCATTCTAAGCTTATAGCACCCAAAAAAACATGATAGTTGATTGTTTAAATCGGTGT
ATAGCAAATATTTTAAAATTTTTAAGAATTGATGCTCCTTCCAGAGTTGTAGCAGAAGATTATTTGTAGATGATAACCTTCTCCATCTGTTTTTGTGCAG
TGTGCATCTGTACCATGTTGAGTGCAATGGTTGTAACCCACACTCTGTAGAAACTCCCGGATTTCCTTAGCCCTGCTATTGGTGGCTTGCAACAATCCCT
CATCTTCCTCGTAAATCAGGTAAAGGGCTTCCCCCTTCTTCCCTTGACAAAAACTTTGATGCCCCCTTAAATACATGAAATCCCAACCCTTAAAATCTAT
TTTTTCAATAAACACCCCCCCT
>LE_HBa0158J05_SP6_102968 (trimmed for quality and cloning vector)
ACTATACTAAACTAACCTCGTTAATGATGCTTTCAAACTCTATATTTGACTACCATTTCTACTTTATGTAATTATTTAATACTAAAGGTAGTACCATAAT
AAAAAGTAATGAAACTCTGGTAAAATGGACAAGTAAAATGGAACGGAGGGAGTATATTACGTGTACTTAATGATCAACAAGTTCACCAATGGAAACCAAG
AGAACAACACAGATCAAAGCAACAACCTCTACAAAAAAAAATTATTATAAATAGCCTGTGCACACATTACATATGGGGTAACCAGAAAGCAAGAAGTGGG
AGAAAACATCCTGCCACTGTCTAAAAAGTTATCAAACAGACAAATCAAATTTTCCTACCTTCTCTTTTCATCTCTGAATCACCCAACCACAAACCTATCA
ACAAAGTTAGCATTGTCATAATCCCCTCAACATGGTATCAGTCAGCCTTCCAATTCATACGAACTGAAAAAAGTAGAGCTCGACTTTGAACAACTGTCGC
ATCAGGTTTTGTTCTATACCAATCATTCTAAGCTTATAGCACCCAAAAAAACATGATAGTTGATTGTTTAAATCGGTGTATAGCAAATATTTTAAAATTT
TTAAGAATTGATGCTCCTTCCAGAGTTGTAGCAGAAGATTATTTGTAGATGATAACCTTCTCCATCTGTTTTTGTGCAGTGTGCATCTGTACCATGTTGA
GTGCAATGGTTGTAACCCACACTCTGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.945573
Expected error %
0.407553
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0158J05
Clone
Clone name
hba-158j5
LE_HBa0158J05
C12HBa0158J05
P158J05
Clone type
BAC
Contamination
none
Estimated length
82,447
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found