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Clone Read LE_HBa0148I02_SP6_101378

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0148I02_SP6_101378
Primer
SP6
ID from Seq. Facility
LE_HBa_148_I02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
351 trimmed for vector and quality, 904 raw
Genbank Accession
DU091966
Sequence
>LE_HBa0148I02_SP6_101378 (raw untrimmed)
GGGGGAAGGGATTAAAGCAGGATTTGGTGGAGGAAAGTTTATATATTCGGGGAAATAGCTTTAAGTTGAAACTAATTACTTTGAATTTTTTCTGCTTAAA
TATTAGGCTACTAATATTTCGTGAGTTAAATCTTTGCTCTGTTTATACACAATTAGGTAATCGAGTCCTATTTATACCGTAATAAAATTAATAAATTTGA
TATTAAAGCTTTAAAAATTAAATTCATAAAATTTAAATTTATATTTATCATATGATATCGTCATTTGTTTCAAAATTCATACTTTAAAAGCATTCATAAT
TGAAAAAGAAGTATTTGATTTGGTCCAAAAAATATTTATTTTAAAAAGGTAAGGTGTTTGATTATGATTTTAGAAGAAAATAAAATATATTATTGTATGA
TAGCAAAAACTTATGCTTCAAAGAGTAACAATCCGGGATAACAGCTGACATAAGTTACTATTTTTCTTGTCTATTCTAATACGGCTCTTCTGCCGTTGTG
CTATTTGCAGTTTATTATATCGCTGCGAATGTATTTATTTTCGTTGTGTATGTTTATATTTTTGCTCATCAAGCTCTGTTATCCGATTGGTATAGTGGAT
GTACTTGATGAATTGATGAATTAAGTATTATATTATGGATGGAAAGTATTTTGTGTCCGTTACAGAATTGTGACCCGTCCGGGGGGTCCTCCCCTCGATT
ATTAGATTCACATAAAGTGCGGCTAATTTTCGTATTCGACTTGTATTATTTTCTGATTTTTGCATTGTAAAGGATCTTATTATCGTTCATTCTTTCTTTA
TAGACTTTGGTTGTTTAATTCATTAAATATCTTGCTATTTTGTTATCTGTTCCTTAACCCTGTCTTTTAAACATCTCTTAATTTTAATTATAACTTTCTA
TATA
>LE_HBa0148I02_SP6_101378 (trimmed for quality and cloning vector)
GGAAATAGCTTTAAGTTGAAACTAATTACTTTGAATTTTTTCTGCTTAAATATTAGGCTACTAATATTTCGTGAGTTAAATCTTTGCTCTGTTTATACAC
AATTAGGTAATCGAGTCCTATTTATACCGTAATAAAATTAATAAATTTGATATTAAAGCTTTAAAAATTAAATTCATAAAATTTAAATTTATATTTATCA
TATGATATCGTCATTTGTTTCAAAATTCATACTTTAAAAGCATTCATAATTGAAAAAGAAGTATTTGATTTGGTCCAAAAAATATTTATTTTAAAAAGGT
AAGGTGTTTGATTATGATTTTAGAAGAAAATAAAATATATTATTGTATGAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.857891
Expected error %
0.516558
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0148I02
Clone
Clone name
hba-148i2
LE_HBa0148I02
P148I02
Clone type
BAC
Contamination
none
Estimated length
79,001
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found