Clone Read LE_HBa0049K02_SP6_10082

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0049K02_SP6_10082
Primer
SP6
ID from Seq. Facility
LE_HBa_049_K02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
774 trimmed for vector and quality, 893 raw
Genbank Accession
Sequence
>LE_HBa0049K02_SP6_10082 (raw untrimmed)
GCCCTAAGGTGTCATGGGCTTCTATNTTCTTCTTCTTTTACCCAATGGATATCAGCTTGAGGCCTCGATAAAATTTGAATTTATGCATTGCAAGACTCAT
TACTAGTGTTATCGCTTCCAACATGAGTTTTTCAGTTCTCAAATGCACGAACTCGAGGCCTATAGTTAAAGGTGAAAAAAATCGAAATCATTCCACGACA
ACCTACGTTGATAGTTTCATCCTTCTATGTAGGGGTGTACAAAATCGAATCGAAAATCAAATCAAACTGCAAATCGAGTCCACCTGAAAAAAAAATCTAA
CTATATTTGAGTTGGTTTAGTTTGAACTAAAAGAAATCAACCCGCGACCAAACCAACACGACATTATATATATAATTTGAAAATTTATTTTATACATAAA
AATATTTACTTTGATATAATTTTTTAAATATTTCTTATATTTTTTCATAGTTTTTATCCTTTAATATATTATTTCAAGTTTGATACTTAGAATTTTGGAT
GGTTCCATAAAAATTATAGTCTACAGATATTGGTTTATTATAGTAAAACTTAAATCAAAATCAAATTAATGCTAATACAAAAAGAAAATAAAATTTAACA
ATAAGAATGACAATAAGGTTTTTGAATACTTGTTCTTTGATTTTACATTAGTTTAGACAATTGAAATACATAATCTAATTTTAATTTCATTTAATATTTA
GTCATGTAATTAATACTTATTAAACTTATTTTAATATGATTTAGTACTTTTAGATTATGATCATTTTCATTATGACTCGTTAATTTACAATATTTATTTT
ACACAAATTCATTATATATATATGGATATTTTTTAGTGTCATTAATCATATCATTATTTGTGAAATATTCTTGTAAAACACCTTAAATAGTTG
>LE_HBa0049K02_SP6_10082 (trimmed for quality and cloning vector)
CTTCTTCTTTTACCCAATGGATATCAGCTTGAGGCCTCGATAAAATTTGAATTTATGCATTGCAAGACTCATTACTAGTGTTATCGCTTCCAACATGAGT
TTTTCAGTTCTCAAATGCACGAACTCGAGGCCTATAGTTAAAGGTGAAAAAAATCGAAATCATTCCACGACAACCTACGTTGATAGTTTCATCCTTCTAT
GTAGGGGTGTACAAAATCGAATCGAAAATCAAATCAAACTGCAAATCGAGTCCACCTGAAAAAAAAATCTAACTATATTTGAGTTGGTTTAGTTTGAACT
AAAAGAAATCAACCCGCGACCAAACCAACACGACATTATATATATAATTTGAAAATTTATTTTATACATAAAAATATTTACTTTGATATAATTTTTTAAA
TATTTCTTATATTTTTTCATAGTTTTTATCCTTTAATATATTATTTCAAGTTTGATACTTAGAATTTTGGATGGTTCCATAAAAATTATAGTCTACAGAT
ATTGGTTTATTATAGTAAAACTTAAATCAAAATCAAATTAATGCTAATACAAAAAGAAAATAAAATTTAACAATAAGAATGACAATAAGGTTTTTGAATA
CTTGTTCTTTGATTTTACATTAGTTTAGACAATTGAAATACATAATCTAATTTTAATTTCATTTAATATTTAGTCATGTAATTAATACTTATTAAACTTA
TTTTAATATGATTTAGTACTTTTAGATTATGATCATTTTCATTATGACTCGTTAATTTACAATATTTATTTTAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.90257
Expected error %
0.112488
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0049K02
Clone
Clone name
hba-49k2
LE_HBa0049K02
C10HBa0049K02
P049K02
Clone type
BAC
Contamination
none
Estimated length
50,965
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found