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Clone Read LE_HBa0144L08_T7_100767

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0144L08_T7_100767
Primer
T7
ID from Seq. Facility
LE_HBa_144_L08-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
630 trimmed for vector and quality, 867 raw
Sequence
>LE_HBa0144L08_T7_100767 (raw untrimmed)
GTTTCGCCCGTCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTACCTCCCATGGAGTAGGGCTTCCCCTTATTTTGCATGGCTGAGATGAA
GTATGCTTAATAGACCTCCTGGCCGTATGTCATGTGACCCATGCATTCACTTTTCCTTGTCTCCTAAGATGAAAAGAGGTGTCTGGAGCATCCCCTGACC
ATTGTTCCACTTTCAAAACATGTGAGCTTTTGGAGAGTATATATCGTTTTTCCCTCAGATTCCTATTTTGAACAGAATACTTTCACAACCATGCTTTCGA
GTGAATATGAGTATGCGACGGTTCATCAACATAATCATAGATAGTTCGCTGTCACAGCATCCGTAAAACATCTTCATCAATACCATATTAACATATATAA
TTTTACTACTCACCTCTCATAGGACGAAATCCACTTTCATTTATCAATATCTGGAAACTGGGGATCATGGGAATTCCTCATGCAATCATGCAATTTAATC
AATTCTTGTGAGATTTCATATACTCTTCTTTCGTAATTCAAAACTCACATGTATATGATCATAACTTCCTAAAAGCCATACTCCCTCGGTTTCACAGAGG
ATAACCTAGTGCGACTTGAAACGCATTCTACGAAAAAGACAGAAGACGTTGAATCTTTGTGGGTTTTTATGAAATTATGTCTCATGTCCCCAAATACCCT
TTAGTCTTGATGTTGTAGACATTCCTCGTGAAGCTTAGATGTTGCTTACTAACGAAAAATATCATTTTTTTAAAAAGACTACTACTGAAAATGGGGTCAT
TCTTTTTAAAAGGAGGGACTAGTAATTAACTGCGGTCATGGGGGGACGTGAAAAACTGTAGATTCAC
>LE_HBa0144L08_T7_100767 (trimmed for quality and cloning vector)
AGCTTACCTCCCATGGAGTAGGGCTTCCCCTTATTTTGCATGGCTGAGATGAAGTATGCTTAATAGACCTCCTGGCCGTATGTCATGTGACCCATGCATT
CACTTTTCCTTGTCTCCTAAGATGAAAAGAGGTGTCTGGAGCATCCCCTGACCATTGTTCCACTTTCAAAACATGTGAGCTTTTGGAGAGTATATATCGT
TTTTCCCTCAGATTCCTATTTTGAACAGAATACTTTCACAACCATGCTTTCGAGTGAATATGAGTATGCGACGGTTCATCAACATAATCATAGATAGTTC
GCTGTCACAGCATCCGTAAAACATCTTCATCAATACCATATTAACATATATAATTTTACTACTCACCTCTCATAGGACGAAATCCACTTTCATTTATCAA
TATCTGGAAACTGGGGATCATGGGAATTCCTCATGCAATCATGCAATTTAATCAATTCTTGTGAGATTTCATATACTCTTCTTTCGTAATTCAAAACTCA
CATGTATATGATCATAACTTCCTAAAAGCCATACTCCCTCGGTTTCACAGAGGATAACCTAGTGCGACTTGAAACGCATTCTACGAAAAAGACAGAAGAC
GTTGAATCTTTGTGGGTTTTTATGAAATTA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.964233
Expected error %
6.12376
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0144L08
Clone
Clone name
hba-144l8
LE_HBa0144L08
P144L08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found