Clone Read LE_HBa0144A23_T7_100269

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0144A23_T7_100269
Primer
T7
ID from Seq. Facility
LE_HBa_144_A23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 894 raw
Sequence
>LE_HBa0144A23_T7_100269 (raw untrimmed)
TCATCACTCCCCTCACACTTTCATCCTCACAAATACTCGTCTATCACAACNACTGCTAAAATGCTATCCAGATAATAATATGACCCCCCCTCTCCCACTT
CACGCCCTCCTTTACTGTCTACGCCCTCTTTATAGAGGGACCCCTCTCCCAACAATCATTTCTCCCAACCCCTACTACCACTTAAAAAGACTATTTACTA
CGTTGACACCATCTNNCATAAAGAGAAATNNTCTTGGATTACCCTCCTCTAAAAAGTAATATATACTCATATATTACTTCATATAATTTTTATACAAATA
ATATACAATACATATTAACTCTTCAATATACATTTATACCCATTAACAATATTACATTAAATATCATTTAATATCCTATAATTATATTATTTTCACCTCT
TTATTTTTTCATCTCTAATNCTTGCCTCTAATTATTAATTCTAATCTCTATTATAAACAAATCTCATACTTTTTAACACTTCTATACTCAACACATAAAA
TACATTAACTATATANCTAATAATTTCTACTTCAAAGTATTCTATTTATTTTACTTTACTAAACATATACATCACATACCAAACTCAACTTATATTACTC
TATACTAACCATACCCAAAAATATCCACCCTACTCCTCACCTCCTTCTCACTTACA
TCTCCCCACCTCTTTCTTTAATATTTCAAATTAATAATAACCGA
ATAAACATAAAAAATACTAACATCTTTCAACAAAAACTAAATCTCACATTACTATAATAACTTAACAATACAAACTCACTACATAACTATCTCACTTCCT
CACACTTCTCCTCAGCTACTTTCCTTCTATCTTTTATATAATATATTATAATAAAAACAATATTTCTTTACTCTCATTTCTTAATCTATCATTT
>LE_HBa0144A23_T7_100269 (trimmed for quality and cloning vector)
TCT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.797023
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0144A23
Clone
Clone name
hba-144a23
LE_HBa0144A23
P144A23
Clone type
BAC
Contamination
none
Estimated length
118,890
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found