Solanum tuberosum mRNA PGSC0003DMT400036436
mRNA details
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| Name | Type | Organism |
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Description
RSH
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|
Location(s)
PGSC_DMv3_219_ch03:46005344..46009338
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GFF source
Cufflinks
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- Mapping depth
- 51.459603
- Source id
- RNASEQ34.4506.2
mRNA sequence
| spliced mRNA sequence, including UTRs |
>PGSC0003DMT400036436 RSH
GACATCTCGAGGCTATTCCGGTCATTATACTTTGCGTATTCCTGGCCCCTAAGCAACCATAAAGAGGAGAGGAGCATGAATGTATAGAATATCAACGCAAATAGTATTTTCATATTCAGATTGAAGAAAGAGTAATTGGAGAAGAAACAAGAACAATTCCAGTAAAAATATCAGTCCACTCTCTCTTCCAACAATTTTTAGGAGTTTTTTTTTTTGTTTAAATTCTTGTTCAAGTTTCATTTTTTCTCATTTTCCCCATTTTTTTGGGAAAAAAATCACTCAGATCTTCCCATATTTGTTGTAAATACCCAACTTATCTTGAAAAATCTGTGAATTTATAGGTTTCCACACATTTATTCAGGTTTAGATTGATTATTTCTGAATTGATTGTAAACAATTTAGGAATTAGGGTTTCGAATTGCTGTAAAATTTGGATCTTTGGTGGTAATATTCAGAATTTCAGCTTCTAGATTGCTGGGTTATGGCGGTTCCGACGATAGCACTGTACGCAAGTCCGCCGAGTAGTGTGTGTTCTACACCATATCAATGCCACTCTCACGCTTCTTATGATTTCGATTTGAACGGCAGATCATCGTCGTCTTCCTCATCGACATCCTCTTCGTCCCAGAAATCCATTGTCGGTGGCCTGTCGTCTCTGTTCTCTTCGCCAACCGTGAAGGCCAGCTATTCAACTGGAACCGAGGATTTGGGGTCTCTGTGGCATGATAGAGGCGACGAATTGAGTAGCTCTTTTCGTTGTTCATCCCTCAGCTCGTCATTGAAAAGGGATCATCAGAGTCCAGTTTCTGTGTTTCAAGGGCCTGTTTCATGTAGCACTAGTAGTAGTGGAATTGGATCATATTCCAGAAGTCCTCCGAAGAGAATTGCTGGGGATGTCTGTTCCATTCGTTCTGGGACTGGTGGATTGTTTAATGGTTTTGTTAGGCACGCCTTGGGATCCTGTGTTGATCACGATCCGGTGGCTTTTCAGGTCCTGGATGTTGATTCCCGTTCATCAGGGCTATTGGATGAACTCACCTTTAACATGGAAGAAGGTTTCTTAGAGTCCAATTCAGAACCTTATGCTAAAACTTTACTGTTGGGTGCACAGGCAAGGCATAAAATCTTTTATGATGATTTTGTGGTGAAGGCATTTTATGAAGCTGAGAAAGCCCATAGAGGACAGGTGCGAGCTACTGGTGATCCTTATCTACAGCATTGCGTTGAGACTGCAGTTTTACTCGCAACGATTGGGGCTAACTCGACTGTTGTTGCTGCTGGACTTTTGCACGACACACTTGATGACACATTCATGACTTATGACTATATATTCCGGACGCTAGGAGCTGGTGTTGCTGATCTGGTTGAAGGGGTGTCAAAGCTTAGTCAATTGAGCAAGCTTGCACGAGACTTCGATACAGCCAGTAAAACTGTTGAGGCAGATCGATTACACACCATGTTCCTTGCTATGACAGATGCAAGGGCTGTTCTCATAAAGCTAGCTGATCGTTTGCATAATATGATTACTTTGGATGCATTACCATCTACAAAGCAGCAAAGATTTGCAAAGGAAACTTTGGAAATTTTTGCTCCTCTTGCTAATCGCCTAGGCATCTCAACCTGGAAAGAGCAGCTGGAGAACCAATGCTTTAAACATCTTAACCCGGATCAGCACAATGAACTCTCATCAAAACTCATGGATTCTTTTGACGAGGCTATGATTACCTCTGCCGTGGAGAAATTGGAGCAAGCGTTAAGTGATGGATCTGTTTCTTATCACGTACTTTCAGGGCGTCACAAGAGCTTGTACAGCATTTACTGCAAGATGCTAAAGAAGAAGCTTAATATGGATGAAGTCCATGACATTCATGGGTTGAGGTTGATTGTTGAAAATGAGGAGGACTGCTATAAAGCACTTCAAGTTGTTCACCAGCTATGGCGCGAGGTACCTGGGAGATACAAGGACTACATAGAAAAACCCAAATGCAATGGGTACCAATCTCTTCACACAGTTGTTCTCGGGGAAGGCATGGCGCCTCTTGAAGTTCAGATCCGAACAAAAGAGATGCACTTGCAAGCTGAATATGGCTTTGCCGCTCATTGGAGATACAAAGAAAATGACTGCAAACACTCCTCTTTTGTTCTTCAGATGGTAGAGTGGGCTCGTTGGGTTGTAACCTGGCAGTGCGAGACAATGAGCAGAGACCAGTCATCTGTTGGCCACACTGAATCGATTCAGCCACCTTGCAAATTCCCAGCTCATTCTGAAGATTGTCCCTTTTCTTGCAAACCTGATTGTGGAACCGATGGGCCTGTCTTTATCATTATGATTGAGAACGATAAGGTCTGTATCTACCTGTGAATCCTGAAAGTTACAGAATTGATAATCATGGTGTCAACTATCAGGAATGTGTTTTGACTCTGTTTTTTCTTTGCAGATGTCTGTGCAAGAATTCGCAGCAAACTCAACTGTGAAGGATCTGTTGGAGAGAGCTGGCCGTGGCAGCTCTAGATGGACACCCTATGGATTTCCTCTGAAGGAAGAGCTAAGGCCAAGGTTGAACCATGAACCAGTTAGTGATCCCAACTGCAAGCTAAGAATGGGAGATGTTATAGAATTAACTCCAGCCATACCACATAAATCATTGACAGAGTACAGGGAGGAGATTCAGCGAATGTATGATCGAGGTGTAAGCCCTCTTCCTGCCGCTGCCAATACAGTAGTTGGTTTGAGGAGTTGACAGTTGATGTTTTTCCCTTCTCCTAGATTAAGGTCCTCCTTTAATCTTGTACATAATTACAAATGATAAGCATTTGTACAGAACAGCCGTGGTTCTGTTTATAAAAAGATAAATTAGGTGACTGATTTATTCAAGTCTCGACTTGCATTTGTTACTTTTGGAAATGCAGACTGCTTTAACTATTGCTGCTTTTCCATTTTCGCCTATATTTATACCATGGTGTATCTCTCTTTCAC
GACATCTCGAGGCTATTCCGGTCATTATACTTTGCGTATTCCTGGCCCCTAAGCAACCATAAAGAGGAGAGGAGCATGAATGTATAGAATATCAACGCAAATAGTATTTTCATATTCAGATTGAAGAAAGAGTAATTGGAGAAGAAACAAGAACAATTCCAGTAAAAATATCAGTCCACTCTCTCTTCCAACAATTTTTAGGAGTTTTTTTTTTTGTTTAAATTCTTGTTCAAGTTTCATTTTTTCTCATTTTCCCCATTTTTTTGGGAAAAAAATCACTCAGATCTTCCCATATTTGTTGTAAATACCCAACTTATCTTGAAAAATCTGTGAATTTATAGGTTTCCACACATTTATTCAGGTTTAGATTGATTATTTCTGAATTGATTGTAAACAATTTAGGAATTAGGGTTTCGAATTGCTGTAAAATTTGGATCTTTGGTGGTAATATTCAGAATTTCAGCTTCTAGATTGCTGGGTTATGGCGGTTCCGACGATAGCACTGTACGCAAGTCCGCCGAGTAGTGTGTGTTCTACACCATATCAATGCCACTCTCACGCTTCTTATGATTTCGATTTGAACGGCAGATCATCGTCGTCTTCCTCATCGACATCCTCTTCGTCCCAGAAATCCATTGTCGGTGGCCTGTCGTCTCTGTTCTCTTCGCCAACCGTGAAGGCCAGCTATTCAACTGGAACCGAGGATTTGGGGTCTCTGTGGCATGATAGAGGCGACGAATTGAGTAGCTCTTTTCGTTGTTCATCCCTCAGCTCGTCATTGAAAAGGGATCATCAGAGTCCAGTTTCTGTGTTTCAAGGGCCTGTTTCATGTAGCACTAGTAGTAGTGGAATTGGATCATATTCCAGAAGTCCTCCGAAGAGAATTGCTGGGGATGTCTGTTCCATTCGTTCTGGGACTGGTGGATTGTTTAATGGTTTTGTTAGGCACGCCTTGGGATCCTGTGTTGATCACGATCCGGTGGCTTTTCAGGTCCTGGATGTTGATTCCCGTTCATCAGGGCTATTGGATGAACTCACCTTTAACATGGAAGAAGGTTTCTTAGAGTCCAATTCAGAACCTTATGCTAAAACTTTACTGTTGGGTGCACAGGCAAGGCATAAAATCTTTTATGATGATTTTGTGGTGAAGGCATTTTATGAAGCTGAGAAAGCCCATAGAGGACAGGTGCGAGCTACTGGTGATCCTTATCTACAGCATTGCGTTGAGACTGCAGTTTTACTCGCAACGATTGGGGCTAACTCGACTGTTGTTGCTGCTGGACTTTTGCACGACACACTTGATGACACATTCATGACTTATGACTATATATTCCGGACGCTAGGAGCTGGTGTTGCTGATCTGGTTGAAGGGGTGTCAAAGCTTAGTCAATTGAGCAAGCTTGCACGAGACTTCGATACAGCCAGTAAAACTGTTGAGGCAGATCGATTACACACCATGTTCCTTGCTATGACAGATGCAAGGGCTGTTCTCATAAAGCTAGCTGATCGTTTGCATAATATGATTACTTTGGATGCATTACCATCTACAAAGCAGCAAAGATTTGCAAAGGAAACTTTGGAAATTTTTGCTCCTCTTGCTAATCGCCTAGGCATCTCAACCTGGAAAGAGCAGCTGGAGAACCAATGCTTTAAACATCTTAACCCGGATCAGCACAATGAACTCTCATCAAAACTCATGGATTCTTTTGACGAGGCTATGATTACCTCTGCCGTGGAGAAATTGGAGCAAGCGTTAAGTGATGGATCTGTTTCTTATCACGTACTTTCAGGGCGTCACAAGAGCTTGTACAGCATTTACTGCAAGATGCTAAAGAAGAAGCTTAATATGGATGAAGTCCATGACATTCATGGGTTGAGGTTGATTGTTGAAAATGAGGAGGACTGCTATAAAGCACTTCAAGTTGTTCACCAGCTATGGCGCGAGGTACCTGGGAGATACAAGGACTACATAGAAAAACCCAAATGCAATGGGTACCAATCTCTTCACACAGTTGTTCTCGGGGAAGGCATGGCGCCTCTTGAAGTTCAGATCCGAACAAAAGAGATGCACTTGCAAGCTGAATATGGCTTTGCCGCTCATTGGAGATACAAAGAAAATGACTGCAAACACTCCTCTTTTGTTCTTCAGATGGTAGAGTGGGCTCGTTGGGTTGTAACCTGGCAGTGCGAGACAATGAGCAGAGACCAGTCATCTGTTGGCCACACTGAATCGATTCAGCCACCTTGCAAATTCCCAGCTCATTCTGAAGATTGTCCCTTTTCTTGCAAACCTGATTGTGGAACCGATGGGCCTGTCTTTATCATTATGATTGAGAACGATAAGGTCTGTATCTACCTGTGAATCCTGAAAGTTACAGAATTGATAATCATGGTGTCAACTATCAGGAATGTGTTTTGACTCTGTTTTTTCTTTGCAGATGTCTGTGCAAGAATTCGCAGCAAACTCAACTGTGAAGGATCTGTTGGAGAGAGCTGGCCGTGGCAGCTCTAGATGGACACCCTATGGATTTCCTCTGAAGGAAGAGCTAAGGCCAAGGTTGAACCATGAACCAGTTAGTGATCCCAACTGCAAGCTAAGAATGGGAGATGTTATAGAATTAACTCCAGCCATACCACATAAATCATTGACAGAGTACAGGGAGGAGATTCAGCGAATGTATGATCGAGGTGTAAGCCCTCTTCCTGCCGCTGCCAATACAGTAGTTGGTTTGAGGAGTTGACAGTTGATGTTTTTCCCTTCTCCTAGATTAAGGTCCTCCTTTAATCTTGTACATAATTACAAATGATAAGCATTTGTACAGAACAGCCGTGGTTCTGTTTATAAAAAGATAAATTAGGTGACTGATTTATTCAAGTCTCGACTTGCATTTGTTACTTTTGGAAATGCAGACTGCTTTAACTATTGCTGCTTTTCCATTTTCGCCTATATTTATACCATGGTGTATCTCTCTTTCAC
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | PGSC0003DMP400024707 | PGSC_DMv3_219_ch03:46005959..46008857 | n/a | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | PGSC0003DMG400014030 | PGSC_DMv3_219_ch03:46005344..46009338 | 3,995 | n/a | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | PGSC0003DME400096536 | PGSC_DMv3_219_ch03:46005344..46006328 | 985 | - | n/a |
| exon | PGSC0003DME400096540 | PGSC_DMv3_219_ch03:46006409..46006567 | 159 | - | n/a |
| exon | PGSC0003DME400096541 | PGSC_DMv3_219_ch03:46006862..46007322 | 461 | - | n/a |
| exon | PGSC0003DME400096542 | PGSC_DMv3_219_ch03:46007878..46008063 | 186 | - | n/a |
| exon | PGSC0003DME400096543 | PGSC_DMv3_219_ch03:46008153..46009338 | 1,186 | - | n/a |
| intron | PGSC0003DMI400061293 | PGSC_DMv3_219_ch03:46006329..46006408 | n/a | - | n/a |
| intron | PGSC0003DMI400061294 | PGSC_DMv3_219_ch03:46006568..46006861 | n/a | - | n/a |
| intron | PGSC0003DMI400061295 | PGSC_DMv3_219_ch03:46007323..46007877 | n/a | - | n/a |
| intron | PGSC0003DMI400061296 | PGSC_DMv3_219_ch03:46008064..46008152 | n/a | - | n/a |
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mRNA details
mRNA details

