Solanum tuberosum mRNA PGSC0003DMT400055103
mRNA details
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| Name | Type | Organism |
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Description
EIL1
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Location(s)
PGSC_DMv3_219_ch01:1964304..1968205
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GFF source
Cufflinks
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- Mapping depth
- 88.748835
- Source id
- RNASEQ2.2433.1
mRNA sequence
| spliced mRNA sequence, including UTRs |
>PGSC0003DMT400055103 EIL1
GATTTTAAAACCTTTTTTTATTTTTTAAAATTTTTTGAGAGATAAAAGGTATAAAATCTGATACCCTTTTTAGGGTTGAAGCTATCTTGCTGCAATTTGTTGTATTAACATGGCTGTGATGGATGAGATTGAAATTGATGTCAGCTCGGACATTGAAATTGATGACATAAAGTGCGATAACATAGCCGAAAAGGATGTCAGCGATGAAGAAATTGAGCCAAACGAATTGGAGAGACGGATGTGGAAGGACCGTGTCAAGCTCAAGCGGCTCAAGGAAAAACAGAAGCTTGCAGCCCAGCTAGCTGCAGAGAAGCAGGACAATAAACAAGTTACTGATCAGGCTACGCGGAAAAAGATGTCAAGAGCTCAAGATGGGATTTTGAAGTACATGTTGAAGCTCATGGAGGTGTGCAATGCTCGAGGATTTGTTTATGGAATCATTCCTGATAAGGGTAAACCTGTGAGCGGTTCGTCAGATAACATAAGAGCTTGGTGGAAGGAGAAGGTGAAGTTTGATAAGAATGGTCTTGCTGCAATAGCCAAGTACGAAGCAGAATGTCTAGCAAGAGGAGACGGTGTAGGCAGCCCAAATGGGAACCCACAAAGTGTCTTGGAAGACTTGCAAGATGCTACCTTGGGGTCCCTTTTGTCTTCTTTAATGCAACACTGTGATCCGCCTCAACGGAAATACCCACTGGAGAAAGGTATCTCGCCACCGTGGTGGCCAACTGGGGATGAGGGATGGTGGGCTAAAATGGGACTACCTAAGGGTCAGAAACCGCCATACAGAAAGCCGCATGATTTGAAGAAGATGTGGAAAGTTGGTGTTCTAACTGCTGTCATAAAGCATATGTCACCTGATATTGCAAAGATCAGGAAATTAATCCGCAAATCGAAGAGTCTGCAGGACAAGATGACTGCTAAGGAGAGCTCAATTTGGCTGGCTGTTTTAAGCAGAGAGGAAGCAACCCTCCAACAAGCAGGCAGTGAGAATGGATCATCTAGCATAGAGGAACCAGCTGGAAGCCGTGGTGAAAAGAAGAAATCTTTAATTAGCAGTGACAGCGACTATGATGTTGATGGCACTGATGATGGTATTGGCTCTGTATCGTCTAGGAATGAGAGGAGAAATCATTTTCATCCTCTAAATGCCATTCGTCAATCTCACCAAAGTACGGAGAAAGGAGATGGACACCATCGAAGGAGAAAACGTGCTAGGTCAAACCTTACTGAGAAACAGATTCAACCATCTCTGCTACATGGTGACGAGCATAGTAACACATTACCTGATATAAACAGTTCAGAAATGCTATTGGCTGGACGTATAACGAGTGACAGCCTACAGGGAAATGACAAGAGCGAAGCAACAAAGCCTGTAGAGAACGACACAGAGAGTCAATCAGAGTTACGATTACAAGACTCGAACCTATCATTCGTTCCATCAGCTAATGTAGTCTCTACAGAGGATACATATATAGGTGCTGGGCCATCACTTTATCCGATGTCTCTAAATTCTGCAGTTGTCCCTTATGAATCAGAGATGCATCTTGAAAATCAAGGCTCTATAGTTCAGCATCAATTTCAAGACGCTCAGTTCCATGGTCTCCAGAAGATTTCTGGGATGAATGATGGACCACAAATTTCCCTATCGCATTATGGACCTCCAAACAATGGGTTGCAATATGGACCTCACAGTTCCATTGTACACACTGAACTGCAAGTTTCTGAATTTGCTCATGGGTCTCAATTTTCTAACTTCAGTCAACCACCTGTATATCACTCTTATTCTTCAGCTGAATTTGGGTCGACACATGCGGAACCACAGTCCCACTTGGCATGCAATGAACTTCAGATTAGGCCAAGGGATTCTGGTGTTGGTCTGTCGCTTCACGGAAGTGGAAATTCTAAAGTCAATCACCATGATGGAAAAGACGTGTTCGGGAATAATCATGACAGACATATTGATATGCCTTTTGCATCTCCACTTACTATTGGCTCGTCATATGCTACACTTGGCAGCCCATTTGACTTGGGGATTGATGTCCAAAGTCATTTTGATAATTCTGATTATGATTTAGATTTTGACAAAGAACTGATGTCATTCTTTGCCTCATAGACAAGTATAAGTGGAAGGACAACATTTAGAATGAGAGTGACAAAGGTGGAACCCTTTCAAGGTGCAACAGATCTTTCTATCATAATATCAGTAGTTCGACTGTAAGTTATCAACTTAGTTTTCTTTTCAAGAAGTCAAATGTAAATCCAGTGACAGCAAACACAATTTTTTACATGTTCAAGAAAAGTGCCTCATGTAAATGAGTTAGTTTCATGAGTAGTAAAGGCTGGAAACATAGAGTTCTTTTTATCTTCTTTAGAAGTTGTAACTTGCTCAAAATATTCTTGACTGAGCTGCACAAGCGATGTAAGTGAAGGATTTCATTGTTACAGTAGCATGATTCTTGGTTCTTTCTCCCTATAAAAAGTGAAGGCCTAACTGATGGCCCAATTTATGACATTTCAACAATTCTTGCCTACTAATATTGTTATTGTTCATTCGTTTATCATTTGATTTTCTTTTACCATAACACATTGTAACATTACTTTGAGCTAACTTGTTCACATTTGTCGAAATGTAACCTCTACAATTTGTAGGGAACTG
GATTTTAAAACCTTTTTTTATTTTTTAAAATTTTTTGAGAGATAAAAGGTATAAAATCTGATACCCTTTTTAGGGTTGAAGCTATCTTGCTGCAATTTGTTGTATTAACATGGCTGTGATGGATGAGATTGAAATTGATGTCAGCTCGGACATTGAAATTGATGACATAAAGTGCGATAACATAGCCGAAAAGGATGTCAGCGATGAAGAAATTGAGCCAAACGAATTGGAGAGACGGATGTGGAAGGACCGTGTCAAGCTCAAGCGGCTCAAGGAAAAACAGAAGCTTGCAGCCCAGCTAGCTGCAGAGAAGCAGGACAATAAACAAGTTACTGATCAGGCTACGCGGAAAAAGATGTCAAGAGCTCAAGATGGGATTTTGAAGTACATGTTGAAGCTCATGGAGGTGTGCAATGCTCGAGGATTTGTTTATGGAATCATTCCTGATAAGGGTAAACCTGTGAGCGGTTCGTCAGATAACATAAGAGCTTGGTGGAAGGAGAAGGTGAAGTTTGATAAGAATGGTCTTGCTGCAATAGCCAAGTACGAAGCAGAATGTCTAGCAAGAGGAGACGGTGTAGGCAGCCCAAATGGGAACCCACAAAGTGTCTTGGAAGACTTGCAAGATGCTACCTTGGGGTCCCTTTTGTCTTCTTTAATGCAACACTGTGATCCGCCTCAACGGAAATACCCACTGGAGAAAGGTATCTCGCCACCGTGGTGGCCAACTGGGGATGAGGGATGGTGGGCTAAAATGGGACTACCTAAGGGTCAGAAACCGCCATACAGAAAGCCGCATGATTTGAAGAAGATGTGGAAAGTTGGTGTTCTAACTGCTGTCATAAAGCATATGTCACCTGATATTGCAAAGATCAGGAAATTAATCCGCAAATCGAAGAGTCTGCAGGACAAGATGACTGCTAAGGAGAGCTCAATTTGGCTGGCTGTTTTAAGCAGAGAGGAAGCAACCCTCCAACAAGCAGGCAGTGAGAATGGATCATCTAGCATAGAGGAACCAGCTGGAAGCCGTGGTGAAAAGAAGAAATCTTTAATTAGCAGTGACAGCGACTATGATGTTGATGGCACTGATGATGGTATTGGCTCTGTATCGTCTAGGAATGAGAGGAGAAATCATTTTCATCCTCTAAATGCCATTCGTCAATCTCACCAAAGTACGGAGAAAGGAGATGGACACCATCGAAGGAGAAAACGTGCTAGGTCAAACCTTACTGAGAAACAGATTCAACCATCTCTGCTACATGGTGACGAGCATAGTAACACATTACCTGATATAAACAGTTCAGAAATGCTATTGGCTGGACGTATAACGAGTGACAGCCTACAGGGAAATGACAAGAGCGAAGCAACAAAGCCTGTAGAGAACGACACAGAGAGTCAATCAGAGTTACGATTACAAGACTCGAACCTATCATTCGTTCCATCAGCTAATGTAGTCTCTACAGAGGATACATATATAGGTGCTGGGCCATCACTTTATCCGATGTCTCTAAATTCTGCAGTTGTCCCTTATGAATCAGAGATGCATCTTGAAAATCAAGGCTCTATAGTTCAGCATCAATTTCAAGACGCTCAGTTCCATGGTCTCCAGAAGATTTCTGGGATGAATGATGGACCACAAATTTCCCTATCGCATTATGGACCTCCAAACAATGGGTTGCAATATGGACCTCACAGTTCCATTGTACACACTGAACTGCAAGTTTCTGAATTTGCTCATGGGTCTCAATTTTCTAACTTCAGTCAACCACCTGTATATCACTCTTATTCTTCAGCTGAATTTGGGTCGACACATGCGGAACCACAGTCCCACTTGGCATGCAATGAACTTCAGATTAGGCCAAGGGATTCTGGTGTTGGTCTGTCGCTTCACGGAAGTGGAAATTCTAAAGTCAATCACCATGATGGAAAAGACGTGTTCGGGAATAATCATGACAGACATATTGATATGCCTTTTGCATCTCCACTTACTATTGGCTCGTCATATGCTACACTTGGCAGCCCATTTGACTTGGGGATTGATGTCCAAAGTCATTTTGATAATTCTGATTATGATTTAGATTTTGACAAAGAACTGATGTCATTCTTTGCCTCATAGACAAGTATAAGTGGAAGGACAACATTTAGAATGAGAGTGACAAAGGTGGAACCCTTTCAAGGTGCAACAGATCTTTCTATCATAATATCAGTAGTTCGACTGTAAGTTATCAACTTAGTTTTCTTTTCAAGAAGTCAAATGTAAATCCAGTGACAGCAAACACAATTTTTTACATGTTCAAGAAAAGTGCCTCATGTAAATGAGTTAGTTTCATGAGTAGTAAAGGCTGGAAACATAGAGTTCTTTTTATCTTCTTTAGAAGTTGTAACTTGCTCAAAATATTCTTGACTGAGCTGCACAAGCGATGTAAGTGAAGGATTTCATTGTTACAGTAGCATGATTCTTGGTTCTTTCTCCCTATAAAAAGTGAAGGCCTAACTGATGGCCCAATTTATGACATTTCAACAATTCTTGCCTACTAATATTGTTATTGTTCATTCGTTTATCATTTGATTTTCTTTTACCATAACACATTGTAACATTACTTTGAGCTAACTTGTTCACATTTGTCGAAATGTAACCTCTACAATTTGTAGGGAACTG
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | PGSC0003DMP400037069 | PGSC_DMv3_219_ch01:1964413..1967569 | n/a | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | PGSC0003DMG400021381 | PGSC_DMv3_219_ch01:1964304..1968205 | 3,902 | n/a | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | PGSC0003DME400144722 | PGSC_DMv3_219_ch01:1967695..1968205 | 511 | + | n/a |
| exon | PGSC0003DME400144724 | PGSC_DMv3_219_ch01:1965598..1967601 | 2,004 | + | n/a |
| exon | PGSC0003DME400144727 | PGSC_DMv3_219_ch01:1964304..1964447 | 144 | + | n/a |
| intron | PGSC0003DMI400091489 | PGSC_DMv3_219_ch01:1967602..1967694 | n/a | + | n/a |
| intron | PGSC0003DMI400091491 | PGSC_DMv3_219_ch01:1964448..1965597 | n/a | + | n/a |
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mRNA details
mRNA details

