Solanum lycopersicum mRNA Solyc12g098920.1.1

mRNA details  
Name
Solyc12g098920.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g098920.1.1
Length
1,746
  
Description
(P)ppGpp synthetase I (GTP pyrophosphokinase) SpoT/RelA (AHRD V1 *--- Q2RHV7_MOOTA); contains Interpro domain(s) IPR007685 RelA/SpoT
Location(s)
SL2.50ch12:66279301..66282768
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0015969
  • GO:0005509
Length
3468
Nb exon
4
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g098920.1.1 (P)ppGpp synthetase I (GTP pyrophosphokinase) SpoT/RelA (AHRD V1 *--- Q2RHV7_MOOTA); contains Interpro domain(s) IPR007685 RelA/SpoT

ATGGAGCTCTACTTAAGCGATTACACTCTCAATTTCCCCTCAAATACTAAAAAATCCCCACACTTACTCTTCTCCAAAACCCCAAATTACTTCCGCCGGCGCCGGCGCCGGAATCGGAGTTGTAAGACCCAGATATCCTCCTCCGCGAGGGTTTCAGCAGTGGTGGCGGCGCCGGAACAGTCCGGCGGGAAAATGGTAGTGGAGTTAGTGGGTGCTTTTAATGAGCTAACTGAAAGAATGGATACTAGTGTTCTTTCTACTAGCTCTTCTCGATTGCTGTTTAAAACTCTTAAATTGTGTATTCCGATTCTTCAGTCACTTCCACTTGCACCCGATGGCCGATCTCCGATATCGAAAGCTCTATCTGTTGCTGTCATTTTAGCTGATTTGCAGATGGATGCTGAAGTTATATCCACTGGGCTACTAAGAGAAGTTCTAGAGACAGGTGCTATATCAATATATGATGTGAGGGATCGGATTGGTACCAGTACTGCTCATTTAATGCATGAAAGCTTGCGTGTGAAGCATATGGCCTTAAAGGTAGAAGTATTGGATGATGATAGCGCAACTGCATTGAGGAAATTTTGTCTGACCTACTATGATGTCAGGGCATTAGTATTAGACCTGGCTATCAAGCTCGATATGATGAGACACCTTGATTATTTACCTAGGTACCGGCAGCAGATGATAGCACTTGAGGTTATGAAACTACATGCTCCTCTAGCGCATGCCATCGGAACTAACCTATTATCTCTTGAACTCGAGGATCTTTCTTTTAGGTACTTGTTTCCTTACTCATATCTATATCTTGATGCATGGTTGAGAAGTCACGAGTCTGGAAATAAGCCTCTGATAGATATCTGCAAGGAGCAGCTGCTTCAGTCCCTCAAATCTGATCCACCATTAAATGAAATGGTGAGTAAGATATCTGTTGAGGGTCGTTATAAAAGTCGTTATAGCACCATGAAGAAACTCTTGAGAGATGGTCGGAAGCTTGAAGAGGTGAATGACATCTTAGGTCTACGAGTTGTATTGACTCCTATATCAGGAGTAGATGAGTCGGAAATCGGGGAAAAGGCTTGCTACAGAGCACGTGAAGTTGTCCAATCTTTGTGGGAAGAGATACCAAGTAGGTCAAAGGACTATATCTTAAGGCCTAAGGCTAATGGATATAGAAGTTTGCACATGGCTGTTGATACCAGTGAAAATGGACGGACTAGACCGCTAATGGAAATTCAAATACGAACAGAAGAAATGGATATGCTAGCATCTGGAGGGCCAGCATCTCATGCATTGTACAAGGGCGGTGTTACTGATCCTGAAGAGGCGAGACATCTAAAGGCAATCATGATCGCTGCAGCAGAGCTTGCAGCATTGCGTCTTAGAGATTTTCCTTCGGCGAATCAAAAAGGTCTGGAAATTGACAAGAGAGGCAGGGTGTTCCGTCTTCTTGACAAGAATGGAGATGGTAAAATAAGCATCGACGAACTTATGGAAGTGATGGAAGAGCTCGGTGCCCCAGGAGATGATGCGCGGGAGATGATGCAACTTCTCGATTCAAACAGTGATGGTTTTCTGAGCTCAGATGAATTTGATATATTTCAGAATCAGGTTGAATTCATCCGGAATATAGAAGACAGAGATGATCATTACCAAACACTGTTAAATGCTAAGCTGCAATTGGCAAACGACACCGGTTTGATTCAACTGTACAGTAAAGAGCAAGGTAGTCTGGTAACAAATTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g098920.1.1SL2.50ch12:66279300..66282768582-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g098920.1SL2.50ch12:66279301..662827683,468-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g098920.1.1.1SL2.50ch12:66282376..66282768393-n/a
exonexon:Solyc12g098920.1.1.2SL2.50ch12:66280012..66280944933-n/a
exonexon:Solyc12g098920.1.1.3SL2.50ch12:66279578..66279862285-n/a
exonexon:Solyc12g098920.1.1.4SL2.50ch12:66279301..66279435135-n/a
intronintron:Solyc12g098920.1.1.2SL2.50ch12:66280945..66282375n/a-n/a
intronintron:Solyc12g098920.1.1.3SL2.50ch12:66279863..66280011n/a-n/a
intronintron:Solyc12g098920.1.1.4SL2.50ch12:66279436..66279577n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F18013788%2Fdetails feature 18013788
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