Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Solanum lycopersicum mRNA Solyc12g095910.1.1

mRNA details  
Name
Solyc12g095910.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g095910.1.1
Length
1,443
  
Description
Vacuolar processing enzyme-3 (AHRD V1 **-- Q852T0_TOBAC); contains Interpro domain(s) IPR001096 Peptidase C13, legumain
Location(s)
SL2.50ch12:65013373..65018422
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006508
Length
5050
Nb exon
9
Sifter term
GO:0004197
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g095910.1.1 Vacuolar processing enzyme-3 (AHRD V1 **-- Q852T0_TOBAC); contains Interpro domain(s) IPR001096 Peptidase C13, legumain

ATGGTTCACGTCGCCGGAGTTTTCATCCTCGTCGGAATCGCCGTGCTTGCCGCCGTCGAAGGACGTAATGTTTTGAAACTTCCGTCGGAAGCTTCCAGATTCTTCGATGACGCAGATGACTCTGTTGGAACCAGATGGGCCGTCCTTCTCGCCGGATCAAATGGTTATTGGAATTATAGACATCAGGCTGATGTATGCCATGCGTATCAGCTATTGAGAAAAGGTGGTCTCAAAGATGAAAATATTATTGTCTTCATGTATGATGACATTGCTCACCATGAAGAGAACCCAAGACCAGGAGTTATTATTAATAGTCCTGCCGGTGAGGATGTTTACGAAGGAGTTCCTAAGGATTACACGGGAGATGATGTTAATGTGCACAACTTTTTAGCTGTTCTCCTTGGTAACAAAACTGCTCTTACTGGAGGTAGCGGAAAGGTGGTGAATAGTGGTCCAAATGATCATATTTTCATATTCTATAGTGATCATGGTGGCCCTGGCGTGCTTGGGATGCCTACCAATCCTTATCTATATGCCGATGATCTAATTGCTGTGTTGAAAAAGAAGCATGCCGCTGGGACATATAAAAGCTTGGTATTGTACATTGAAGCTTGCGAGTCTGGAAGTATATTTGAGGGACTTCTTCCTAATGGTCTAAATATTTATGCCACAACAGCTTCAAATGCTGAAGAAAGCAGCTGGGGAACCTATTGTCCTGGAGAATATCCTAGTCCTCCTCCTGAATATGAGACTTGCTTGGGTGATTTGTATGCTGTTTCCTGGATGGAGGACAGTGAAATGCACAACTTGCGGACTGAAAATTTGAGGCAGCAGTATCACTTGGTCAAAAAGAGAACTGCAAATGGAAATACTGCCTATGGTTCCCATGTCATGCAATTTGGTGATCTACAACTGAGTATGGAGTCTCTATTCAGGTTTATGGGTACAAATCCTGCAAATGATAACTACACTTATGTAGATGACAATTCCTTGTTGGCATCATCAAAGGCTGTCAACCAGCGTGATGCAGATCTTTTACATTTCTGGGACAAGTTCCGCAAGGCTCCTGAAGGCTCTGCTCGGAAAGTTGAAGCTCAGAAACAATTCACTGAAGCTATGTCACACAGAATGCACCTAGATGAACGCATTGCCCTTGTTGGTAAGCTTCTGTTTGGAATTCAAAAAGGTCCTGAGGTGCTGAAGCATGTTCGATCTGCGGGTCAGCCTCTTGTTGATGATTGGGCCTGCCTTAAATCTTTTGTAAGAACATTTGAGTCGCACTGCGGATCGTTATCCCAATATGGAATGAAACACATGCGTTCCATTGCCAATATCTGCAATGCTGGAATTCAGATGGAGCAGATGGTGGAGGCATCAGCACAAGCTTGTCCTAGCATCCCTTCCAATATTTGGAGTTCCCTCCACAGGGGCTTTAGTGCGTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g095910.1.1SL2.50ch12:65013372..65018422481+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g095910.1SL2.50ch12:65013373..650184225,050+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g095910.1.1.1SL2.50ch12:65013373..65013558186+n/a
exonexon:Solyc12g095910.1.1.2SL2.50ch12:65014947..65015111165+n/a
exonexon:Solyc12g095910.1.1.3SL2.50ch12:65015185..65015341157+n/a
exonexon:Solyc12g095910.1.1.4SL2.50ch12:65016285..6501637086+2
exonexon:Solyc12g095910.1.1.5SL2.50ch12:65016470..65016669200+n/a
exonexon:Solyc12g095910.1.1.6SL2.50ch12:65017045..6501709349+1
exonexon:Solyc12g095910.1.1.7SL2.50ch12:65017323..65017532210+n/a
exonexon:Solyc12g095910.1.1.8SL2.50ch12:65017942..65018148207+n/a
exonexon:Solyc12g095910.1.1.9SL2.50ch12:65018240..65018422183+n/a
intronintron:Solyc12g095910.1.1.1SL2.50ch12:65013559..65014946n/a+n/a
intronintron:Solyc12g095910.1.1.2SL2.50ch12:65015112..65015184n/a+n/a
intronintron:Solyc12g095910.1.1.3SL2.50ch12:65015342..65016284n/a+n/a
intronintron:Solyc12g095910.1.1.4SL2.50ch12:65016371..65016469n/a+n/a
intronintron:Solyc12g095910.1.1.5SL2.50ch12:65016670..65017044n/a+n/a
intronintron:Solyc12g095910.1.1.6SL2.50ch12:65017094..65017322n/a+n/a
intronintron:Solyc12g095910.1.1.7SL2.50ch12:65017533..65017941n/a+n/a
intronintron:Solyc12g095910.1.1.8SL2.50ch12:65018149..65018239n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F18011630%2Fdetails feature 18011630
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)