Solanum lycopersicum mRNA Solyc12g088940.1.1

mRNA details  
Name
Solyc12g088940.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g088940.1.1
Length
2,043
  
Description
Protein serine/threonine kinase (AHRD V1 *-*- D3BP85_POLPA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch12:64125377..64130154
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006468
Length
4778
Nb exon
11
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g088940.1.1 Protein serine/threonine kinase (AHRD V1 *-*- D3BP85_POLPA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

ATGCCATTTTCGAGGAAAACATTTTCATTGTTTTTAAGTTCTTCTGCTTCTACTTCACCTTCTCATGAGTCTCCTAAGACTTCTGGAGGTGGAGGAGGAAAGCGGCTTACTCGTTTACGTAAATTGAGACATGTTGGTGATGATGAGATTGATTTGCAGCATAATGATTTTGGTTCTCAATCTATGCCTGTTTCCCCTGATTCCTATAAGAATTCAGGATCATCAGGGTCTCAATCAACTCAGATTAAACAGCGTTGTCGTTGGTCTAAATCCGTCGAGCCTCATCCTTTGCCATTACCTGAGTTCAATTCTGTGCCAAAACAAAGTACTAGTGATGCTAATTTGCCTACCAGAGTACTCCAAGGGGATGCTTCAAATCCTGCTGTTATAAGGGATCCTTCTCATCAAACTCCAGTGGAGATGGCAAATCCTGTGCATAAAAGATCATCTACTCCAACTTATCGTCGTCGACGTTTCAGTCAGGATCAGAATTCTAAAAGTGTTGAAGAGAACTTCAGGCTTAATGTCCCTGCTAGAAGTGCTCCAGGCAGTGGTTTTACAAGTCCGAATCTTAGCCCGATAAGATATAGCACAGTAGACCTTTTCCATCCTACATTTCATCAGGCATCACCACCTACAGCCACTTCTTCGGATAGATGGGTAGGTTATTCTGCCCAACTTTTGACAGCAAGGGTTACACAAAGTGCTGATCATTCTCCCCTTAGTAGCCCAGCTCGACAAAATCTAGTAAACAAAACTTTGAATCACCAAAATGTTGCTGTGCATTCACATCACAAATCACTCCCGGAAAGTCCTGTGGATTGGCCTGAAGGCAATAATGTGCACCCTCTACCACTTCCTCCCGGAGTTTCACAACAGCCACAGTTACCCACCACTCAAAACAATACGGATAAACCAGATACACCATATGTAAAAGGCCAATGGCAAAAGGGGAAACTTTTAGGTCGTGGTACTTATGGAAGTGTATATGAAGCTACTAACCGTGAAACCGGTGCTTTGTGTGCCATGAAAGAAGTTGATCTCAATCCAGATGATCCTAAATCTGCCGAATGTATAAAGCAGCTAGAACAGGAAATACGAGTTCTCCGACAGTTGAAGCACCAAAATATTGTTCAATATTACGGCAGTGAAATAATGAAAGATAGTTTTTGCATATATCTGGAATATGTTCATCCAGGATCAATTAATAAGTTTGTCCGGGATCATGGTGGAGCTATGACAGAGTCAATAGTTCGAAACTTTACGAGACATATAGTATCAGGCCTGGCTTACTTGCACAGTACTAAGACGATACACAGGGACATAAAGGGGGCAAATTTGCTTGTCGATGCATCAGGAATCGTCAAGCTTGCAGACTTTGGATTAGCAAAACATCTGTCGAGTCATGCAACTGAGCTATCGCTAAAAGGGAGTCCACACTGGATGGCTCCAGAGGTAATGCAGGCTATGTTACGGAAAGATGCCAATCCAGAACTTGCCTGTGCTATTGATATATGGAGTCTAGGTTGTACTGTAATTGAAATGTTTACTGGACAGCCCCCTTGGAGTGGATTAGACGGGGTGAAAGCTATGTTCAGTGCACTAAACAAATCACCACCTGTACCAGAAACGTTGTCTTCGGAAGGAAAGGATTTCCTCCGATGCTGCTTTCAGAGGAAACCTGCAGATAGACCAACAGCTTTGATGCTACTTGAGCATCCTTTCTTAAGTAATACTAATTCGCGTGAAAATAGTGCTACTGTTTCAGGTTCCTCAGAAGATTTTTCGCGGATGAAATTGCATAGTCCAAAGGACATGACAAACCATATCATGGAATTGAATTCATCTAGGCAAACAAAATCTCCATATAACGGTGAAACAAGCCATCAATCACATTCTGTAACGTGCGATTATGGAGCAACTTCTCACCACTCTCCTCGTTCAACACTCGAAATACTTCCTTGTATTTCTTCACCAGAGCTGAACCCTAGTACATTTGCACCAGCCAAGTCCTCAAATAGTATTTTCTCTCCTTTGAACTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g088940.1.1SL2.50ch12:64125376..64130154681-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g088940.1SL2.50ch12:64125377..641301544,778-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g088940.1.1.1SL2.50ch12:64129763..64130154392-n/a
exonexon:Solyc12g088940.1.1.10SL2.50ch12:64125696..6412576671-n/a
exonexon:Solyc12g088940.1.1.11SL2.50ch12:64125377..64125545169-1
exonexon:Solyc12g088940.1.1.2SL2.50ch12:64128086..64128697612-1
exonexon:Solyc12g088940.1.1.3SL2.50ch12:64127924..6412801188-1
exonexon:Solyc12g088940.1.1.4SL2.50ch12:64127743..6412780563-n/a
exonexon:Solyc12g088940.1.1.5SL2.50ch12:64127486..64127649164-n/a
exonexon:Solyc12g088940.1.1.6SL2.50ch12:64127245..6412732076-1
exonexon:Solyc12g088940.1.1.7SL2.50ch12:64126582..6412664160-n/a
exonexon:Solyc12g088940.1.1.8SL2.50ch12:64126374..64126499126-n/a
exonexon:Solyc12g088940.1.1.9SL2.50ch12:64125900..64126121222-n/a
intronintron:Solyc12g088940.1.1.10SL2.50ch12:64125767..64125899n/a-n/a
intronintron:Solyc12g088940.1.1.11SL2.50ch12:64125546..64125695n/a-n/a
intronintron:Solyc12g088940.1.1.2SL2.50ch12:64128698..64129762n/a-n/a
intronintron:Solyc12g088940.1.1.3SL2.50ch12:64128012..64128085n/a-n/a
intronintron:Solyc12g088940.1.1.4SL2.50ch12:64127806..64127923n/a-n/a
intronintron:Solyc12g088940.1.1.5SL2.50ch12:64127650..64127742n/a-n/a
intronintron:Solyc12g088940.1.1.6SL2.50ch12:64127321..64127485n/a-n/a
intronintron:Solyc12g088940.1.1.7SL2.50ch12:64126642..64127244n/a-n/a
intronintron:Solyc12g088940.1.1.8SL2.50ch12:64126500..64126581n/a-n/a
intronintron:Solyc12g088940.1.1.9SL2.50ch12:64126122..64126373n/a-n/a
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