Solanum lycopersicum mRNA Solyc12g088230.1.1

mRNA details  
Name
Solyc12g088230.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g088230.1.1
Length
2,934
  
Description
Early-responsive to dehydration protein-like (AHRD V1 **-- Q5JKX1_ORYSJ); contains Interpro domain(s) IPR003864 Protein of unknown function DUF221
Location(s)
SL2.50ch12:63673907..63681540
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
7634
Nb exon
12
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g088230.1.1 Early-responsive to dehydration protein-like (AHRD V1 **-- Q5JKX1_ORYSJ); contains Interpro domain(s) IPR003864 Protein of unknown function DUF221

ATGAAGCTATCTGCACTCTTGACTTCTGCCGGAGTTAATATTGCAGTCTGTGTGGTGCTGTTAATTCTGTATTCCTTACTTAGGAAACAACCAACTTTTGTAAATGTCTACTTCAGCCAGAGATTTGCTCGGGTACGAACAAGACAGCTTGGTGGCTTTAACTTTGAGCGATTTGTTCCGTCTCCTAGTTGGATCTTGAAGGCATGGGAAGCATCCGATGATGAAATAGTTGCTGCTGGGGGCTTGGATGCGTTCGTGTTGGTGCGGATGATTGTTTTCAGTGTTCGAATATTCTCCATTGCAACTACTCTAGGACTTTTCCTCGTGGTGCCTCTTAATTATTTTGGTCAAGATATAAAGCGTCAGCGAATTCCTGCCGAGTCATTGGAGCTATTCACCATTGTGAATGTTGAGCCAGGGTCAAGATGGTTTTGGGTTCACTGCCTCGCACTGTATATCATATCCTGCTCCGCTTGTCTTCTTCTTTACTCTGAGTACAAGAGTATCTCAAAGAAGCGGCTGGCGTACTTCAGTTCATCACTTTCCCGCCCATGTTACTTCACTGTTCTGGTCCGTTCTATCCCAAAGTCTAAGGAAGAATCATACAGTCAAACACTGGAGAAATTCTTCATGAATTACTATGGATCAAGTTATCTATCTCATCAAATTGTCTATCGCTCTGGCTATGTCCAGAAACTGCTGACTGATGCAGAGGGGGTGTTCAGGATGCTTAAAACAACCCAAAAGGAGCTTTATGCTGGATCAAATTTTATGATATGTGGCATATGCGGAGGAGCTACTTCGTCTTTCAACATGATCACCAATGAGTGTGATCGTGATAAAGGAAGAGATGATTGTGATGGTTCAGATTTGAGAAAAAAGGAGTCTGCAGCTGCTTTAGTTTTTTTCAGGAATCGGTATGCTGCTTTAGTTGCTTCGCAAGGTCTTCAATCTTTGAATCCCATGTCATGGGTTACAGATCTTGCTCCAGAACCAGATGATATGTACTGGTCAAACATTTGTGTTCCTTACAGACTCCTTTGGATTCGTAAAATTGCGCTTCTAGTGGCCTCTATTCTTTTTGTGGCATTTTTTCTTGTGCCCGTTTCACTAACACAGAGTCTCGTTCACCTCGACAAGCTGCAAAAGACATTTCCATTTCTTCGAGGATTTTTAAAGAGGAGTGGTGTTACTCAGCTTGTCACAGGATATCTACCAAGTGTTGTATTAATTTTGTTTTCCTACATAGTTCCTCCATTGATGATGCTATTTTCTAAAATGGAGGGCTCTATCTCTCGTAGTGGCAGGAAAAGGAGTGCATGCATAAAAGTTCTATACTTCTTCATCTGGAATGTTTTCTTTTGTAACATTGTCTCTGGATCTGTTATTGACAGATTCTTTAAAATTTTTAAGGATGTGAACAATCTACTTTCAACGGCTGTGCCATCAACGGCGACCTTCTTTATGACTTATGTTTTGACTTCTGGCTGGGCAAGTCTGTCTGTTGAACTCTTACAACCATTCGGTCTCATCTGCAGATTGTTCTCCAGGTTTATTATGAGAAACGCCGATGCTTCATGTTATGGAACACTGACTTTTCCATACCATACAGAAGTTCCGAGGATCCTCCTATTTGGCCTCTTTGGCTTTGCATACGCCATTTTGGCACCTTTAATACTGCCATTCTTGGTAGTTTATTATTCCATTGCTTACCTCGTATATCGTAATCAGATCCTCAATGTATATGTGACAAAATACCAAACTGGTGGAACCTATTGGCCTATTGTGCACAACACAACAATTTTCTCAATGGTGCTGATGCAAATTATAGCATTGGCGGTTTTTGGATTTAAAAAATCTTCATCTACATCAAGCTTCACTATTCCGTTGATAATCTGTACACTCCTCTTCCACGAGTACTGTAGGCAAAGGTTTGAACCATTGTTCAAGGACCCTCCTGCTCCGATCCTCATTGAGATGGATAGGCAGGACGAGGTACATGGGAGGATGAAAGAGATGTATCAACAACTCCAATCCGCGTATTGTCAGTTCAAATCAACCTTATTTTCACTGGGTAAAGCTGCTCCTGGAAATGACGAAGAGAACATGAGTATCCATACGGTTCAAGACATAGGAGATGTTAATCCAGGGAAAAGTCCTTCACATCTTCCTCCATCATGTACATCTGTTGAAATTAAAAGTCCTCATCATCCTTTATCACATACGTCAAGTCCTCATCTTCTATCACCACACGCGTCTTTGGAAATTAAAAGTCCTCCACATATCCCATCATCACGTACGTCTTTGGAAATTAGAAGTCCTCCGCATATTCCTTCATCATGTACATGTTTGGAAGCAAAAAACCCTTCTCATCTTCCTTCATCACATACATTTTTAGAAATTAGAAGTCCTCACCTTCCTTCATCACGTATGTCATTGGAAATTAAAAGTTCTTCTCATCGTCTTTCACCACGTAGTAGGTCTTTGGAAATTAGACGTCCTCATCTTCCGTCACCGCGTACATCTTTGGAAATTAGAAGTTCTTATCTTCCTTCACCACATACACCTTTGGAAATTAAAAGCCCTCATCTTCCTTCTTCAGATACATCTTGGGAAATTAAAAGTCCCCTTCTTCCTTCACCGCGCGAATCTTCAGAAACTAAAAGTCATCATTTTGCATCACCGCATAAATCTTCAGAGATTAAAAGTCCTCTTCTTCGTTCACCACGTGAATCTTTGGAAATTAAAAGCCCTCGTCCTGCTTCACCTTGTAAATCTTCCGAAATTAAGAGTCCCCATCTTCCTTCACCACGTACATCTTTGGAAATTAACAGTCCTCTTCATCCTTCATCAAGTACATCTTCAGAAATTGAAGAATCGCGTGGGACTCCTTGGAAGTGTACAGCAAACATACATGCGAAAAATGGCGTCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g088230.1.1SL2.50ch12:63673906..63681540978-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g088230.1SL2.50ch12:63673907..636815407,634-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g088230.1.1.1SL2.50ch12:63681260..63681540281-n/a
exonexon:Solyc12g088230.1.1.10SL2.50ch12:63674902..63675085184-n/a
exonexon:Solyc12g088230.1.1.11SL2.50ch12:63674092..63674826735-2
exonexon:Solyc12g088230.1.1.12SL2.50ch12:63673907..6367395650-2
exonexon:Solyc12g088230.1.1.2SL2.50ch12:63680837..63680983147-1
exonexon:Solyc12g088230.1.1.3SL2.50ch12:63680198..6368026164-1
exonexon:Solyc12g088230.1.1.4SL2.50ch12:63679854..63680063210-n/a
exonexon:Solyc12g088230.1.1.5SL2.50ch12:63678570..63678749180-n/a
exonexon:Solyc12g088230.1.1.6SL2.50ch12:63677344..63677642299-n/a
exonexon:Solyc12g088230.1.1.7SL2.50ch12:63676311..63676581271-1
exonexon:Solyc12g088230.1.1.8SL2.50ch12:63675825..63676103279-n/a
exonexon:Solyc12g088230.1.1.9SL2.50ch12:63675158..63675391234-n/a
intronintron:Solyc12g088230.1.1.10SL2.50ch12:63675086..63675157n/a-n/a
intronintron:Solyc12g088230.1.1.11SL2.50ch12:63674827..63674901n/a-n/a
intronintron:Solyc12g088230.1.1.12SL2.50ch12:63673957..63674091n/a-n/a
intronintron:Solyc12g088230.1.1.2SL2.50ch12:63680984..63681259n/a-n/a
intronintron:Solyc12g088230.1.1.3SL2.50ch12:63680262..63680836n/a-n/a
intronintron:Solyc12g088230.1.1.4SL2.50ch12:63680064..63680197n/a-n/a
intronintron:Solyc12g088230.1.1.5SL2.50ch12:63678750..63679853n/a-n/a
intronintron:Solyc12g088230.1.1.6SL2.50ch12:63677643..63678569n/a-n/a
intronintron:Solyc12g088230.1.1.7SL2.50ch12:63676582..63677343n/a-n/a
intronintron:Solyc12g088230.1.1.8SL2.50ch12:63676104..63676310n/a-n/a
intronintron:Solyc12g088230.1.1.9SL2.50ch12:63675392..63675824n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F18009520%2Fdetails feature 18009520
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