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Solanum lycopersicum mRNA Solyc12g056740.1.1

mRNA details  
Name
Solyc12g056740.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g056740.1.1
Length
1,911
  
Description
ATP-dependent RNA helicase (AHRD V1 ***- D3BPQ9_POLPA); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch12:62817358..62823403
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
6046
Nb exon
9
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g056740.1.1 ATP-dependent RNA helicase (AHRD V1 ***- D3BPQ9_POLPA); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

ATGGGAGTTACAGGCAGAGCCCTGCTCAACCTTTCTCTCCTCCCTTTTCGTTTTCCCTTAACCAGAAACCCTCTTCTTCCTCAGCCTCGCAGGGTTTATCTAGGGTTTAGACCCCTTTCTTCTACAACTACTACTGCTCCTTCTTATGCTGCTGTTGCTGAAGAAGAAGATGCACTTCAACCTGTTAAGCATTCAATTCTATTAGAAAGACTTAGACTTAGACATCTCAGAGAATCCCCAAAACCCAATTCAGAAATCAAGCAATTAGTACGGAAACAAGTAGAGGTTGATGATGGAGGTGTTAAGAAGAGTAAGAAGAAAGCGGTGGCGTCGAGTTTTGAGGAATTGGGGTTGACGGAAGAGGTTATGGGGGCTTTAGGTGAAATGGGTATTTCGGAACCGACTGAGATTCAGTCGATTGGTATACCTGCTGTGATTGAAGGGAAAAGTGTGGTATTGGGTTCACATACGGGTTCTGGGAAGACTCTTGCTTATATGTTGCCTATTGTTCAGTTGTTGAGGCGAGATGAGGAATTGGATGGTATGCTCATGAAGCCTAGGCGCCCCCGAGCTGTTGTGTTGTGCCCTACTAGGGAGCTCTGTGAGCAGGTTTTTCGTGTGGCAAAATCTATCAGTCATCATGCTCGATTTAGATCTACCATGGTTAGTGGTGGCGGACGTCTGAGACCTCAAGAAGATTGTTTGGCAAGCCCAATTGACATGATTGTGGGGACTCCAGGCAGGGTTCTACAACATATTGAAGAGGGAAATATGGTTTATGGTGACATCAGATACTTGGTCTTGGATGAGGCTGATACCATGTTTGATCGTGGTTTTGGTCCAGATATACGAAAATTTCTTGCGCCATTGAAAAACCGTGCTTCAAAGACTGATGATGAAGGATTTCAAACCGTTTTGGTGACGGCAACAATGACAAAGGCAGTTCAAAAGCTGGTTGATGAGGAATTTCAAGGGATTGAGCATTTACGTACTTCTTCATTGCATAAGAAGATTGCTTCTGCTCGTCATGATTTCATCAAGCTTTCAGGTTCTGAGAACAAGATGGAGGCGTTGCTACAGGTTCTTGAGCCAAGTTTAGCAAAGGGAAACAGGGTGATGGTATTCTGTAACACATTGAATTCTAGTCGTGCTGTGGATCACTTTCTCAATGAAACCCAAATTTCTACTGTAAACTACCATGGGGAAGTTCCAGCAGAGCAGAGGGTTGAAAACCTTGCAAAGTTTAAGAGCAATGAAGGAGATTGTCCTACTTTAGTCTGCACAGACTTGGCTGCTAGAGGACTGGACTTGGATGTGGATCATGTCATCATGTTTGATTTCCCTAAGAATTCTATTGACTATCTCCATCGCACGGGAAGGACTGCTCGTATGGGTGCCAAAGGGAAAGTAACAAGTTTAATTGCCAAAAAGGACTTACTTTTGGCCAATTGCATTGAGGAAGCCATAAAGAAGAATGAGAGCTTGGAGTCTCTCTCGGTAGACGGTATCAAAAGAGACAATGCCAGGTCTCGCATTACTGAACAGAAGGACAAGCGTGAAAAGTCGGTGAAAGTTTCAAATTCAAGAGGCAAGGCTACAGCTTCCACAGGCAAATCCTCTAGTGTTACAAGGAAGACTATCGATTCAAAAAGGTCTGCAAAGACTACCGATTCAAAAAGATCTCCAAAGACTACCGATTCTAAAAGATCCCCAGGAACCAAGTTTGGTAAAGTACCAGCTAAGTCAAAACCAAAGATAGCTATGAAAGTGTCCAAAAAGACCAGCAGTTCAACAGGAAAGAGACGAGTAGATAGCCGAAGCTCCAGTGTCTCCACAAAGAAACTAAATGTTGTTGGATTCAGGGGTAGGAGTTCATCATCGAGTAATAATACAAGGGTTAAGTCTGCTTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g056740.1.1SL2.50ch12:62817357..62823403637-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g056740.1SL2.50ch12:62817358..628234036,046-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g056740.1.1.1SL2.50ch12:62822891..62823403513-n/a
exonexon:Solyc12g056740.1.1.2SL2.50ch12:62821518..6282161396-n/a
exonexon:Solyc12g056740.1.1.3SL2.50ch12:62821250..62821438189-n/a
exonexon:Solyc12g056740.1.1.4SL2.50ch12:62821040..62821180141-n/a
exonexon:Solyc12g056740.1.1.5SL2.50ch12:62819528..62819668141-n/a
exonexon:Solyc12g056740.1.1.6SL2.50ch12:62818754..62818896143-n/a
exonexon:Solyc12g056740.1.1.7SL2.50ch12:62818199..62818328130-1
exonexon:Solyc12g056740.1.1.8SL2.50ch12:62818042..6281809049-n/a
exonexon:Solyc12g056740.1.1.9SL2.50ch12:62817358..62817866509-2
intronintron:Solyc12g056740.1.1.2SL2.50ch12:62821614..62822890n/a-n/a
intronintron:Solyc12g056740.1.1.3SL2.50ch12:62821439..62821517n/a-n/a
intronintron:Solyc12g056740.1.1.4SL2.50ch12:62821181..62821249n/a-n/a
intronintron:Solyc12g056740.1.1.5SL2.50ch12:62819669..62821039n/a-n/a
intronintron:Solyc12g056740.1.1.6SL2.50ch12:62818897..62819527n/a-n/a
intronintron:Solyc12g056740.1.1.7SL2.50ch12:62818329..62818753n/a-n/a
intronintron:Solyc12g056740.1.1.8SL2.50ch12:62818091..62818198n/a-n/a
intronintron:Solyc12g056740.1.1.9SL2.50ch12:62817867..62818041n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F18007504%2Fdetails feature 18007504
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