Solanum lycopersicum mRNA Solyc12g019110.1.1

mRNA details  
Name
Solyc12g019110.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g019110.1.1
Length
2,103
  
Description
Valyl-tRNA synthetase (AHRD V1 ***- B9LKX4_CHLSY); contains Interpro domain(s) IPR002303 Valyl-tRNA synthetase, class Ia
Location(s)
SL2.50ch12:9128686..9150270
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005737
  • GO:0000166
Length
21585
Nb exon
18
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g019110.1.1 Valyl-tRNA synthetase (AHRD V1 ***- B9LKX4_CHLSY); contains Interpro domain(s) IPR002303 Valyl-tRNA synthetase, class Ia

ATGTTATGCTTACTGTCTATCTTGTCACATTGTATGCCTTCATGTTTCTATGAAGATTTAACTCAACAGAAGTTGGATGAACGTTATGCTAAGTATATAGGAAAGCAGGCTATTGTGCCATTGACATTTGGTCGCCATGTGCCAATTATTTCTGATAAGTATGTCGACAAAGACTTTGGAACTGGTGTATTGAAGATAAGTCCTGGACATGATCACAATGATTACCTCCTTGCTCGCAAGCTTGGTCTTCCTATACTTAATGTGATGAATAAAGACGGGACTCTAAATGAGGTGGCTGGGCTATATGCTGGCCTTGACCGGTTTGAGGCAAGAAAAAAACTTTGGTCAGATCTCGAGGAGACGGGCTTGGCTGTAAAGAAAGAGACTCACACTTCACGAGTTCCTAGATCCCAGCGTGGTGGAGAAATTATAGAACCTCTAGTTAGTAAGCAATGGTTCGTCACAATGGAGCCTTTGGCTGAGAGGGCACTTGAAGCAGTTTCAAATGGAGAATTGAATATTATGCCCGAAAGGTTTGAGAAGATATATAAGCACTGGCTCTCTAATATCAAGGATTGGTGTATAAGCAGACAATTGTGGTGGGGACACCGAATACCAGTTTGGTATGTTTCTGGTAAAGACTGTGAAGAAGAATATATTGTTGCTAGGAATTACAGAGAAGCTCTCACAAAAGCCCAAGAGAAGTATGGGAAAAATGTCGAAATATATCAGGATCCAGATGTCCTTGATACCTGGTTTTCAAGTTCATTGTGGCCCTTCAGCACACTTGGATGGCCAGATGAGTCAGCAGAGGATTTTAAGCGGTTTTATCCAACATCAGTTCTTGAAACTGGGCACGACATACTGTTCTTTTGGGTGGCACGAATGGTGATGATGGGAATTGAGTTTACTGGGACTGTCCCCTTTTCAAATGTTTATCTTCATGGACTAATCCGTGATTCTCAAGGCAGAAAAATGTCGAAATCATTGGGGAATGTCGTAGATCCCCTTGACACCATTGCTGAGTATGGAACCGATGCTTTGCGTTTCACTCTTGCCTTAGGGACTGCTGGTCAGGATCTAAATTTGTCCACAGAGAGGTTGTCATCTAACAAGGCATTCACCAACAAATTGTGGAATGCTGGCAAGTTCATATTGCGGAATTTGCCTCGTCAAGATGACACTCCTGCTTGGGAAGCCTTACGGGCCCATAAGTTTGATAATATAGAGTCTGTGCTGAAGCTCCCACTACCTGAATGCTGGGTGGTATCAAAGCTTCATGTACTTGTTGATGAAGTCACTGCAAGTTATGAGAAATTTTTCTTCGGAGATGTTGGAAGAGAAATATATGACTTCTTTTGGTCTGATTTTGCTGATTGGTACATTGAAGCTAGTAAAGCTCGTCTGTATCACTCTGGAGATCATTCTGTTGCATCTGTATCACAAGCAGCTCTGTTATACATTTTTGAGAACATTCTTAAATTGCTGCATCCATTTATGCCTTTCGTAACTGAGGAGCTCTGGCAGGCATTACCCAGTAGAGGGGAAGCTCTTATAGTTTCTGCATGGCCACTTACTTCACTTCCCAGGAATATTGATTCCATAAAAAAGTTTGAGAATTTACAGGCATTGACTAGAGCCATCAGAAATGTACGAGCAGAGTATGCAGTTGAGCCAGCAAAGCTCATTTCTGCATCTATCGTCGCAAATCCAGATGTCATTCAGTATATCTCTGGAGAAATAGATGTTTTGGCTCTTCTTTCGAGACTGGATTTGGGAAATGTCAATTTTGTAGAATCTCCTCCAGGAGACGCAAACCAGTCTGTCCACATTGTTGCTGGTGAAGGTCTGGAAGCTTATCTTCCTCTATCAGATATGGTGGACATCTCTGCTGAAGTACAGCGTCTCTCTAAGCGCCTTGTCAAGTTGCAAGCTGAATATGATGGACTGATAGCTCGTTTGAGTTCTCCAAGTTTTGTAGAGAAAGCTCCTGAGGATATTGTTCGTGGTGTCAGAGAAAAAGCAGCAGAGGCAGAAGAGAAGTTAACTCTAACTAGAAACCGCCATGATTTCCTCAAGTCAAAAGTTTTGATTGCGAATTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g019110.1.1SL2.50ch12:9128685..9150270701+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g019110.1SL2.50ch12:9128686..915027021,585+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g019110.1.1.1SL2.50ch12:9128686..912876075+n/a
exonexon:Solyc12g019110.1.1.10SL2.50ch12:9141850..9141987138+n/a
exonexon:Solyc12g019110.1.1.11SL2.50ch12:9142795..914284551+n/a
exonexon:Solyc12g019110.1.1.12SL2.50ch12:9142923..9143035113+n/a
exonexon:Solyc12g019110.1.1.13SL2.50ch12:9144329..9144476148+1
exonexon:Solyc12g019110.1.1.14SL2.50ch12:9145378..9145482105+n/a
exonexon:Solyc12g019110.1.1.15SL2.50ch12:9145568..9145669102+n/a
exonexon:Solyc12g019110.1.1.16SL2.50ch12:9149596..914966873+n/a
exonexon:Solyc12g019110.1.1.17SL2.50ch12:9149783..9149949167+2
exonexon:Solyc12g019110.1.1.18SL2.50ch12:9150142..9150270129+n/a
exonexon:Solyc12g019110.1.1.2SL2.50ch12:9128883..912896684+n/a
exonexon:Solyc12g019110.1.1.3SL2.50ch12:9130030..9130178149+n/a
exonexon:Solyc12g019110.1.1.4SL2.50ch12:9130268..9130385118+1
exonexon:Solyc12g019110.1.1.5SL2.50ch12:9130486..9130602117+n/a
exonexon:Solyc12g019110.1.1.6SL2.50ch12:9131295..9131515221+n/a
exonexon:Solyc12g019110.1.1.7SL2.50ch12:9132232..913232190+1
exonexon:Solyc12g019110.1.1.8SL2.50ch12:9140835..9140946112+1
exonexon:Solyc12g019110.1.1.9SL2.50ch12:9141629..9141739111+n/a
intronintron:Solyc12g019110.1.1.1SL2.50ch12:9128761..9128882n/a+n/a
intronintron:Solyc12g019110.1.1.10SL2.50ch12:9141988..9142794n/a+n/a
intronintron:Solyc12g019110.1.1.11SL2.50ch12:9142846..9142922n/a+n/a
intronintron:Solyc12g019110.1.1.12SL2.50ch12:9143036..9144328n/a+n/a
intronintron:Solyc12g019110.1.1.13SL2.50ch12:9144477..9145377n/a+n/a
intronintron:Solyc12g019110.1.1.14SL2.50ch12:9145483..9145567n/a+n/a
intronintron:Solyc12g019110.1.1.15SL2.50ch12:9145670..9149595n/a+n/a
intronintron:Solyc12g019110.1.1.16SL2.50ch12:9149669..9149782n/a+n/a
intronintron:Solyc12g019110.1.1.17SL2.50ch12:9149950..9150141n/a+n/a
intronintron:Solyc12g019110.1.1.2SL2.50ch12:9128967..9130029n/a+n/a
intronintron:Solyc12g019110.1.1.3SL2.50ch12:9130179..9130267n/a+n/a
intronintron:Solyc12g019110.1.1.4SL2.50ch12:9130386..9130485n/a+n/a
intronintron:Solyc12g019110.1.1.5SL2.50ch12:9130603..9131294n/a+n/a
intronintron:Solyc12g019110.1.1.6SL2.50ch12:9131516..9132231n/a+n/a
intronintron:Solyc12g019110.1.1.7SL2.50ch12:9132322..9140834n/a+n/a
intronintron:Solyc12g019110.1.1.8SL2.50ch12:9140947..9141628n/a+n/a
intronintron:Solyc12g019110.1.1.9SL2.50ch12:9141740..9141849n/a+n/a
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