Solanum lycopersicum mRNA Solyc12g011030.1.1
 mRNA details
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| Name | Type | Organism | |
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Synonyms / aliases
mRNA:Solyc12g011030.1.1
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Length
834
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Description
Xyloglucan endotransglucosylase/hydrolase 7 (AHRD V1 ***- C0IRG6_ACTDE); contains Interpro domain(s) IPR016455 Xyloglucan endotransglucosylase/hydrolase
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Location(s)
SL2.50ch12:3892612..3893717
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005975
- GO:0048046
- Length
- 1106
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc12g011030.1.1 Xyloglucan endotransglucosylase/hydrolase 7 (AHRD V1 ***- C0IRG6_ACTDE); contains Interpro domain(s) IPR016455 Xyloglucan endotransglucosylase/hydrolase
ATGTCTTCTAAATTTTCATCAACATTGCTTCTTCTTATTTCAATACTAATGAGTATCCAATTACTAGCCTCAGCTGGTAATTTCTATAGAGATGTAGACATAACTTGGGGCGAAGGACGCGGTAAAATACAAGAAGGCGGTAGAGGCCTTGCCCTATCGCTTGATAAACTTTCTGGCTCTGGCTTTCAATCCAAAAATGAGTACCTTTTTGGAAGATTCGATATGCAACTTAAACTCGTCCCTAAAAACTCTGCTGGCACTGTAACAACTTTCTTCTTATCTTCACAAGGAGAAGGACATGATGAGATCGATTTCGAGTTCTTAGGCAATGTCTCTGGCCAGCCTTACACTATCCATACCAATGTATACACACAAGGAAAAGGAAACAAAGAACAACAATTTCATCTTTGGTTTGATCCAACTGCCGCGTTTCACACTTACACCATCGTCTGGAATCCTCATCGCATAGTGTTCTTAGTAGATAACAGTCCAATTAGAGTGTTCAACAACCATGAAAGCATGGGAATTCCATTTCCCAAGAGTCAAGCAATGAAAGTATACTGCAGTTTATGGAATATTGGGCACTTGCACCATTCACTGCTTATTACAGAAACATTAACATTGATGGTTGTGCAGTATCATCAGGTAACCTCTTCATGTAAGTCCATCGGTTCAATAAACAACGCGAAGCCATGGCAAACACATGAACTTGATGGTAAGGGACGGAATAGACTACGATGGGTGCAGACCAAACACATGGTTTACAATTACTGTGCTGATTCTAAGAGGTTTCCACAAGGCTTTTCTGCTGAATGCAAGAGTTCAAGATTTTAA
ATGTCTTCTAAATTTTCATCAACATTGCTTCTTCTTATTTCAATACTAATGAGTATCCAATTACTAGCCTCAGCTGGTAATTTCTATAGAGATGTAGACATAACTTGGGGCGAAGGACGCGGTAAAATACAAGAAGGCGGTAGAGGCCTTGCCCTATCGCTTGATAAACTTTCTGGCTCTGGCTTTCAATCCAAAAATGAGTACCTTTTTGGAAGATTCGATATGCAACTTAAACTCGTCCCTAAAAACTCTGCTGGCACTGTAACAACTTTCTTCTTATCTTCACAAGGAGAAGGACATGATGAGATCGATTTCGAGTTCTTAGGCAATGTCTCTGGCCAGCCTTACACTATCCATACCAATGTATACACACAAGGAAAAGGAAACAAAGAACAACAATTTCATCTTTGGTTTGATCCAACTGCCGCGTTTCACACTTACACCATCGTCTGGAATCCTCATCGCATAGTGTTCTTAGTAGATAACAGTCCAATTAGAGTGTTCAACAACCATGAAAGCATGGGAATTCCATTTCCCAAGAGTCAAGCAATGAAAGTATACTGCAGTTTATGGAATATTGGGCACTTGCACCATTCACTGCTTATTACAGAAACATTAACATTGATGGTTGTGCAGTATCATCAGGTAACCTCTTCATGTAAGTCCATCGGTTCAATAAACAACGCGAAGCCATGGCAAACACATGAACTTGATGGTAAGGGACGGAATAGACTACGATGGGTGCAGACCAAACACATGGTTTACAATTACTGTGCTGATTCTAAGAGGTTTCCACAAGGCTTTTCTGCTGAATGCAAGAGTTCAAGATTTTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc12g011030.1.1 | SL2.50ch12:3892611..3893717 | 278 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc12g011030.1 | SL2.50ch12:3892612..3893717 | 1,106 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc12g011030.1.1.1 | SL2.50ch12:3892612..3892887 | 276 | + | n/a |
| exon | exon:Solyc12g011030.1.1.2 | SL2.50ch12:3892982..3893175 | 194 | + | n/a |
| exon | exon:Solyc12g011030.1.1.3 | SL2.50ch12:3893314..3893419 | 106 | + | 1 |
| exon | exon:Solyc12g011030.1.1.4 | SL2.50ch12:3893460..3893717 | 258 | + | n/a |
| intron | intron:Solyc12g011030.1.1.1 | SL2.50ch12:3892888..3892981 | n/a | + | n/a |
| intron | intron:Solyc12g011030.1.1.2 | SL2.50ch12:3893176..3893313 | n/a | + | n/a |
| intron | intron:Solyc12g011030.1.1.3 | SL2.50ch12:3893420..3893459 | n/a | + | n/a |
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