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Solanum lycopersicum mRNA Solyc12g010040.1.1

mRNA details  
Name
Solyc12g010040.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g010040.1.1
Length
1,734
  
Description
Leucyl aminopeptidase (AHRD V1 ***- D7DWG6_NOSA0); contains Interpro domain(s) IPR011356 Peptidase M17, leucyl aminopeptidase IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal
Location(s)
SL2.50ch12:3180908..3187436
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005737
  • GO:0005622
Length
6529
Nb exon
10
Sifter term
GO:0003779
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g010040.1.1 Leucyl aminopeptidase (AHRD V1 ***- D7DWG6_NOSA0); contains Interpro domain(s) IPR011356 Peptidase M17, leucyl aminopeptidase IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal

ATGGCCGCATTGAGAGTTTCTTCAGCATTGGCTTGTTCATCTTCTTCATCTTTTCACTCATACCCTTCAATTTTTACTAAATTTCAATCTAGTCCCATCTGGTCTTTTTCAATTTCAGTTACACCCTTGTGTTCAAGAAGAGCTAAAAGAATGGCTCATTCTATTGCTCGTGATACTCTTGGTCTTACTCATACTAATCAAAGTGATGCTCCTAAGATTTCATTTGCTGCTAAAGAGATTGATCTGGTGGAATGGAAAGGAGACATACTTACAGTAGGTGCCACAGAGAAGGACTTGGCTAGAGACGGGAATTCTAAGTTCCAGAATCCACTATTGCAAAAGCTAGATTCCAAATTGAGTGGCTTATTGTCTGAAGCTTCATCTGAGGAGGATTTTAGTGGAAAGGCTGGACAATCCACAATTTTGAGGCTTCCTGGTCTTGGCTCAAAAAGGATTGCTCTAGTTGGGCTTGGCTCACCAACATCATCAACTGCTGCTTATCGCTGTTTAGGGGAGGCTGCTGCTGCAGCTGCCAAGTCTGCTCAGGCTAGTAATATCGCCATTGCTCTTGCTTCTACGGATGGACTCTCTGCAGAGTTGAAGCTTAGCTCTGCCTCTGCCATAACAACTGGAGCTGTGCTGGGGACATTTGAAGATAATAGGTTTAAGTCAGAGTCAAAGAAACCAACATTGAAATCTTTGGATATTCTTGGACTGGGTACTGGACCTGAGATAGAGAAGAAAATCAAGTATGCAGCAGATGTCTGTGCAGGTGTTATACTCGGAAGAGAGCTTGTCAATGCACCCGCCAATGTTCTTACGCCTGCGGTACTTGCTGAAGAGGCCAAAAAGATTGCGTCCACTTATAGCGATGTCTTTTCTGCAAACATCTTGGATGTTGAGCAGTGCAAAGAATTGAAAATGGGATCCTATTTAGCTGTCGCTGCAGCTTCTGCAAATCCTGCTCATTTCATCCATTTGTGTTATAAGCCTAGTAGTGGAGAAATAAAAAAGAAGATAGCCTTGGTTGGAAAGGGATTAACTTTTGACAGTGGTGGCTACAACATCAAGACTGGACCTGGTTGTTCTATTGAGCTAATGAAGTTTGACATGGGAGGGGCTGCAGCTGTTTTGGGTGCAGCAAAAGCTCTTGGTCAGATAAAACCCGCTGGAGTAGAGGTGCATTTCATTGTTGCAGCTTGTGAGAATATGATCAGTGGGACAGGCATGAGGCCTGGAGACATTATCACTGCTTCAAATGGGAAGACAATTGAGGTTAACAACACGGATGCTGAGGGTAGACTCACACTTGCTGATGCGTTGGTATATGCCTGTAACCAAGGTGTAGAAAAGATAGTTGATTTGGCAACATTAACTGGTGCTTGTGTGGTTGCTCTTGGGCCTTCAATTGCTGGTATTTTTACACCTAGCGATGACCTAGCTAAGGAGGTGGTTGCAGCTTCTGAGGTAAGCGGTGAAAAACTATGGAGGTTGCCGATGGAGGATAGCTACTGGGACTCTATGAAATCAGGAGTGGCTGATATGGTGAACACGGGAGGTCGTCCAGGTGGTGCGATAACCGCTGCTCTCTTCCTGAAGCAGTTTGTTAACGAGAAGGTCCAATGGATGCATATCGACTTAGCTGGTCCTGTCTGGAGTGATAAAAAGAAAAACGCCACGGGTTTTGGTGTTTCAACTTTGGTGGAATGGGTGCTGAAGAACTCTACAAATTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g010040.1.1SL2.50ch12:3180907..3187436578-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g010040.1SL2.50ch12:3180908..31874366,529-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g010040.1.1.1SL2.50ch12:3187221..3187436216-n/a
exonexon:Solyc12g010040.1.1.10SL2.50ch12:3180908..3181039132-n/a
exonexon:Solyc12g010040.1.1.2SL2.50ch12:3184560..3184974415-n/a
exonexon:Solyc12g010040.1.1.3SL2.50ch12:3184284..3184478195-2
exonexon:Solyc12g010040.1.1.4SL2.50ch12:3183973..3184198226-2
exonexon:Solyc12g010040.1.1.5SL2.50ch12:3183704..3183830127-1
exonexon:Solyc12g010040.1.1.6SL2.50ch12:3183511..318360696-n/a
exonexon:Solyc12g010040.1.1.7SL2.50ch12:3182727..318280478-n/a
exonexon:Solyc12g010040.1.1.8SL2.50ch12:3182156..318221661-n/a
exonexon:Solyc12g010040.1.1.9SL2.50ch12:3181602..3181789188-2
intronintron:Solyc12g010040.1.1.10SL2.50ch12:3181040..3181601n/a-n/a
intronintron:Solyc12g010040.1.1.2SL2.50ch12:3184975..3187220n/a-n/a
intronintron:Solyc12g010040.1.1.3SL2.50ch12:3184479..3184559n/a-n/a
intronintron:Solyc12g010040.1.1.4SL2.50ch12:3184199..3184283n/a-n/a
intronintron:Solyc12g010040.1.1.5SL2.50ch12:3183831..3183972n/a-n/a
intronintron:Solyc12g010040.1.1.6SL2.50ch12:3183607..3183703n/a-n/a
intronintron:Solyc12g010040.1.1.7SL2.50ch12:3182805..3183510n/a-n/a
intronintron:Solyc12g010040.1.1.8SL2.50ch12:3182217..3182726n/a-n/a
intronintron:Solyc12g010040.1.1.9SL2.50ch12:3181790..3182155n/a-n/a
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Related viewsNone found
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