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Solanum lycopersicum mRNA Solyc12g008900.1.1

mRNA details  
Name
Solyc12g008900.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g008900.1.1
Length
1,584
  
Description
Cytokinin oxidase/dehydrogenase 2 (AHRD V1 ***- C0LPA7_SOLTU); contains Interpro domain(s) IPR015345 Cytokinin dehydrogenase 1, FAD and cytokinin binding
Location(s)
SL2.50ch12:2209297..2213073
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0055114
  • GO:0050660
Length
3777
Nb exon
5
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g008900.1.1 Cytokinin oxidase/dehydrogenase 2 (AHRD V1 ***- C0LPA7_SOLTU); contains Interpro domain(s) IPR015345 Cytokinin dehydrogenase 1, FAD and cytokinin binding

ATGGCTAAGTTTTTTTTATCCTATGGTTATAATATTATTATTTTCTTTATTATTACTCATTTAATGTCCATTTTAGGAAAGTTAAAACCATGGAATCCTTCAATTCCTTATGAAATTCTTTCACTTAATATTTCATCAAAACTTAGTACAAATTCTCATGCTATTAAAGAATCTTCCAAAGATTTTGGAAAAATTATTCAAGAAATATTACCAGCTGCTGTTCTTTATCCTTCTTGTGTTAATGACATAATTGACCTCATACAATTTTCTTATGACCTTTCTGTCCCTTTTCATGTAGCAGCCAAAGGTCATGGACATTCCATTAGGGGACAAGCCATGGCAAAAAATGGGGTAATTGTGGAAATGAGTTCTTTAAATAATAATAATAATGAGAATTGTGGTGTTAGGGTTTCTTGGGATTCGGATTTAGGGTTTTACGCGGATGTTGGAGGTGAACAATTATGGATTGATGTTCTTCATAACACCCTAGAGTATGGCTTAGCACCTGTTTCATGGACAGATTATTTGTACCTTACCGTTGGTGGTACACTCTCTAATGCTGGAATTAGTGGTCAAACTTTTCGATATGGTCCTCAAATAAGTAACGTTCATGAGATGGATGTTATTACAGGTAAAGGGGAATTAATGACTTGCTCCAAAGATATGAATTCAGAATTGTTTTTTGGAGTTTTAGGAGGTTTGGGACAGTTTGGAATAATAACAAGAGCAAGAATTGTCTTGGATAAAGCACCAACAAGAGTGAAATGGGTGAGAATGTTATATGATGATTTCTCAAAATTCACAAAAGATCAAGAACATCTTATTTCAATTCATAATAATGGATTGGATTATGTTGAAGGCTCTCTAATGATGGAGCAAAGCTCTCTAAATAATTGGAGATCTTCATTTTATTCACCTTCCAATCAAACCAAAATTGCTTCATTATTATCCAAAAATAAAATCATGTATTGCTTGGAAATAGTGAAGTACTATGATGACCAAAATGCTAATACTATTGATAAGGAGTTGAAGAAGTTGGTAAAAGGATTGAAGTATGTAGGTGGATTTATGTTCAAGAAAGATGTGAGTTTTGTGGAATTTTTGAATAGAGTTAGAAGTGGGGAATTAGAGTTACAATCAAAAGGAATGTGGGATGTTCCACATCCATGGCTCAATTTGTTTGTACCAAAGTCTTCTATCATGCATTTTAATGCTGCTGTTTTTGTGGACATAATCCTCAGACAAAACAAGACAAATGGACCCATACTTGTCTACCCAACAAGTAGGAAAAGATGGGATGATAGGATGTCAGCAATAATACCAGAAGAAGAAACATTTTATTGTGTGGGACTTTTACATTCTTCAAGTGGATATAATGAATGCAAAATTTTGGATAATCAAAATGAAGAAATATTAAATTATTGTGATAAAGTTGGCCTCAATATAAAGCAATATCTTCCACATTACAAGACAAAAGAGGATTGGATCAAACATTTTGGTAAAAAATGGAATATTTTTCAACAAAGAAAAGATCTATTTGATCCAAAGATGATTCTATCACCAGGACAAAGAATTTTTAATTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g008900.1.1SL2.50ch12:2209296..2213073528-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g008900.1SL2.50ch12:2209297..22130733,777-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g008900.1.1.1SL2.50ch12:2212443..2213073631-n/a
exonexon:Solyc12g008900.1.1.2SL2.50ch12:2211524..2211651128-2
exonexon:Solyc12g008900.1.1.3SL2.50ch12:2210898..2211161264-n/a
exonexon:Solyc12g008900.1.1.4SL2.50ch12:2210430..2210698269-n/a
exonexon:Solyc12g008900.1.1.5SL2.50ch12:2209297..2209588292-1
intronintron:Solyc12g008900.1.1.2SL2.50ch12:2211652..2212442n/a-n/a
intronintron:Solyc12g008900.1.1.3SL2.50ch12:2211162..2211523n/a-n/a
intronintron:Solyc12g008900.1.1.4SL2.50ch12:2210699..2210897n/a-n/a
intronintron:Solyc12g008900.1.1.5SL2.50ch12:2209589..2210429n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17994092%2Fdetails feature 17994092
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