Solanum lycopersicum mRNA Solyc12g008410.1.1

mRNA details  
Name
Solyc12g008410.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g008410.1.1
Length
2,493
  
Description
RNA-dependent RNA polymerase family protein (AHRD V1 ***- D7L6F2_ARALY); contains Interpro domain(s) IPR007855 RNA-dependent RNA polymerase, eukaryotic-type
Location(s)
SL2.50ch12:1846727..1856324
GFF source
ITAG_eugene
From BOGAS
1
Length
9598
Nb exon
16
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g008410.1.1 RNA-dependent RNA polymerase family protein (AHRD V1 ***- D7L6F2_ARALY); contains Interpro domain(s) IPR007855 RNA-dependent RNA polymerase, eukaryotic-type

ATGGCAGAATTTTACTCTCACAACGATGAAGAAGTTGAACTTCCATCTTCAGTACAGCAAATGATCAACCAAATCTGCAAAAAAGAGCGACAAAATTCACCAGATGATACAGTACGAAGACTCCTTGTAGCAATCGGAGAAGAACGTTCGCTTTATATTTTGAACGAAATCTCAAAATGTCAGATCAAAAAAACCCTAAGTGGATTCATTGTTTTCATGGCGAAAAAATACTATCAATCGGAAACTCAACAGTTTTATCAGAAGCAAAATCATGAACAACCAGTTCTTTCTGCTGAAAGTTTTTATCATTCGCCTCAGATTCGAAGAAATTCACTGTCTTCTCCGAATTCCTCTTGTTCTTCTGTCAATTTTTCACCTAGAAATCGGCCGATTTTTCAGGATAGAGACATAGTAGGTGATACATCTGATTCTCCTACATCAGGTCCACGAATACCATCACCTCCACTGAGTCCAGTGACAACTAGCTTTCAAAAATGTCATTACGATCCTAGTCCATCTAAATTCAGAGACAGGGCCAGCACACGAGGAATAAGTGAACAGTTGCTGGCACTCAATAAGCTTGAATTCAGGAAATTCTTTTTGATTCTAAACTACATTGGGAGGAGGAAGGTGGAAGATGTAATTACGCTTCATGATGTTGGTGACATTTTGGATATGATATATCAACCTATGTCTCATTTTGAGTCATATATTTGGAATAAATATGGTCATCTTTGTGAACATAATAAACGGGTGCAGTATCTTGATTGGGATTCAGGAAGGACGCATCTTTATCATTGTCATGTCCATTCGGATCGAAGCTATACTTTTAAGGGTCCTTACCTGAAAGCAGAAAGAACCCATCTGCAACATTCATTAGGAGATGAGAATGTATTGATTGTCAAGTTTGAGCAAAACACCCCAGGGTGTCCAGAAGAGATTGTTCAGAATGGAATTCTTGTTGGTTTGAGGCGCTATCGCTTTTTTGTTTATAAGGATGACGGGAAGAAGAGAAGGTTAAAGGACAAAGAGGAAAAGATCGATTCTGTCAAATGCTACTTTGTTCGAATGGAATCTCTTAATCCTTATGAAAATGAAACTTACATTTTGCATGACAAGATGGTTCATGAAGCAAGGTGCAATTTCATGCATGTACACATGGTCTCTAGCATGGCTAAATACATGGCCAGGTTCTCCCTAATTTTATCCACGACAGTAAAGCTTCAAGTTGATCTGAATTCAGTGAATATTGACAGAATTGAAGATATATATTGTCATGATAAGAGTGGACGAATTATCTATGATGAAGATGGGAAACCACTTATACACACAGATGGGACTGGATATATTTCAGAAGACTTGGCAAGAAAGTGTCCGCAAGATTTTTTCAATGTGAAGCATAAGTGTGCCAACTTAGTGAGATATGCCAATGGTGTCAAACTTGGGGAGAATTCATCTGAGTTGGGAGAGGCAGAATTTCAGAGTGGGGAACCGCCTCTGTTGATGCAGTGCCGTCTATTCTACAATGGTCTTGCTGTAAAGGGAACCCTTCTAGTCAATAGAAAGCTGCCACAGCGCACAATTCAGATTAGGCCCTCAATGATCAAGGTCGAGGCAGATCCAAGATTGTCAAGAGCTCATATGTTTAACTCATTGGAAATAAATACACCCAGTCTTAAACCTAGGAATACTTATCTATCAAGAACTCTTATTGCTCTGCTGACCTATGGAGGTGTTCCCGTGGAGTATTTCTACGATATACTCAATAATACTTTGGAGGAGACACAAAGGTTATACTCAGATGAGGTGACAGCACTAAAAGTTGCGGTAAACCATAGAGATCGTGATGATGCCTCTACTGCCACAAGTATGATAATGGCTGGAGTACCTCTTACTGAACCGTATCTATGGTGTTGTTTATCTTCCCTGGCAAAGGAAGAAAGAAATGGGCTCAAGGGAGGAAGACTTCCTATTGCTGATACTTTCTATCTAATGGGGACAGCTGATCCCACTGATACTTTAAATCGCCATGAAGTCTGTGTTATTCTTGAACATGGGCAAATATTTGGAGAGGTATTAATATACAGGAATCCTGGACTTCATTTTGGTGATATCCATAGGCTACTTGCTGTCCCTGTGAAGAACCTCGGAGACATAGTTGGAAATGCTAAATATGGAATATTTTTCTCCACAAAAGGTCCGAGATCAGCGGCCACTGAAATTGCTAATGGTGATTTTGATGGAGATAAATATTGGATCTCTCAAAACCCCCAGCTGTTAAAATATTTCACTGCAAGTAGACCGTGGAGCCGAATCCATTCAACACCAAAGGCATTGCATAGGGAGCCCAACAACTTCTCTGCGGAGGAAAGGGAGCATGAACTCTTTCAGACATTTCTAGAAACTAGGATGCCAAAAGTGCAACACACAGTTCCAGTATATCTGAATGGTAAAAGTTGCTCATCCTTGGGAGTCGGGAAGTCCCCGAGCTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g008410.1.1SL2.50ch12:1846726..1856324831+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g008410.1SL2.50ch12:1846727..18563249,598+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g008410.1.1.1SL2.50ch12:1846727..1847132406+n/a
exonexon:Solyc12g008410.1.1.10SL2.50ch12:1853011..185308272+n/a
exonexon:Solyc12g008410.1.1.11SL2.50ch12:1853257..1853363107+n/a
exonexon:Solyc12g008410.1.1.12SL2.50ch12:1853987..1854135149+1
exonexon:Solyc12g008410.1.1.13SL2.50ch12:1854707..1854932226+2
exonexon:Solyc12g008410.1.1.14SL2.50ch12:1855578..1855803226+1
exonexon:Solyc12g008410.1.1.15SL2.50ch12:1856025..1856167143+n/a
exonexon:Solyc12g008410.1.1.16SL2.50ch12:1856249..185632476+1
exonexon:Solyc12g008410.1.1.2SL2.50ch12:1849088..1849304217+2
exonexon:Solyc12g008410.1.1.3SL2.50ch12:1849388..1849523136+1
exonexon:Solyc12g008410.1.1.4SL2.50ch12:1849809..184988375+n/a
exonexon:Solyc12g008410.1.1.5SL2.50ch12:1850273..1850426154+n/a
exonexon:Solyc12g008410.1.1.6SL2.50ch12:1851038..1851239202+2
exonexon:Solyc12g008410.1.1.7SL2.50ch12:1851333..185142088+1
exonexon:Solyc12g008410.1.1.8SL2.50ch12:1851590..1851730141+n/a
exonexon:Solyc12g008410.1.1.9SL2.50ch12:1852808..185288275+n/a
intronintron:Solyc12g008410.1.1.1SL2.50ch12:1847133..1849087n/a+n/a
intronintron:Solyc12g008410.1.1.10SL2.50ch12:1853083..1853256n/a+n/a
intronintron:Solyc12g008410.1.1.11SL2.50ch12:1853364..1853986n/a+n/a
intronintron:Solyc12g008410.1.1.12SL2.50ch12:1854136..1854706n/a+n/a
intronintron:Solyc12g008410.1.1.13SL2.50ch12:1854933..1855577n/a+n/a
intronintron:Solyc12g008410.1.1.14SL2.50ch12:1855804..1856024n/a+n/a
intronintron:Solyc12g008410.1.1.15SL2.50ch12:1856168..1856248n/a+n/a
intronintron:Solyc12g008410.1.1.2SL2.50ch12:1849305..1849387n/a+n/a
intronintron:Solyc12g008410.1.1.3SL2.50ch12:1849524..1849808n/a+n/a
intronintron:Solyc12g008410.1.1.4SL2.50ch12:1849884..1850272n/a+n/a
intronintron:Solyc12g008410.1.1.5SL2.50ch12:1850427..1851037n/a+n/a
intronintron:Solyc12g008410.1.1.6SL2.50ch12:1851240..1851332n/a+n/a
intronintron:Solyc12g008410.1.1.7SL2.50ch12:1851421..1851589n/a+n/a
intronintron:Solyc12g008410.1.1.8SL2.50ch12:1851731..1852807n/a+n/a
intronintron:Solyc12g008410.1.1.9SL2.50ch12:1852883..1853010n/a+n/a
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Related viewsNone found
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