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Solanum lycopersicum mRNA Solyc12g006790.1.1

mRNA details  
Name
Solyc12g006790.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g006790.1.1
Length
2,802
  
Description
ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Location(s)
SL2.50ch12:1200019..1205876
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
5858
Nb exon
22
Sifter term
GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g006790.1.1 ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

ATGAAGTTAGAACTTGAGCAAAAGCATATGGTTTCAAGAACTCCTTTACAAGAGTCGTTGAATCAGAACGCGCAATGCCAAAGTAGTGGAGAGCATAGTAGAATGGAAGAAGTAAAGAGACATAATAATGCGGGGAAGAGAAGAGGTAGGAGGAAAGGGAAAGGGATATTAGTCGAAAAAATGCAGGATAACTCTGTTTGTTCTGCTTCATCATCATCCGAAAGGAGTCTTGTGTTCCCTCGTAGGCCGGGATATGGACAATTAGGTACCAAGTGTTTGGTTAAAGCTAACCATTTCATTGCTGAATTATCAGAAAGGAACTTAAGCCAGTATAGCGTAAGAATTACTCCTGAAGTTAAGTGTACAAGATTGAACAAGGCTATAATGGCTGAGTTGGTTAAACTTCATAAAGACGCGGATTTGGGTAAAAGAGTTCCGGTTTTTGATGGAAGAAGAACGCTTTACACAGCGGGGTTGCTCCCTTTTAACTCGAAAGAGTTCACTATAACTCTTGGTGATGATGATGAGTGGATAGGAATCACAAAGGAGCGTAAATTTGCTGTCACGATCAAGTTAATCTCACAAGCCAACATGCTTCAGTTACGCGAACTTCTTGCAGGGAAACAAGTTGACAATCCTCCACAAGCACTTAAAATCATCGATATTGTGCTAAGGGAACTTGCTTCTCAAAGGTACATATCCGTTGGGAGATTCTTCTATTCTCCGAATATTAAAAAGCCACAGACACTAGGTAATGGTTTACAGTCTTGGAGGGGGTTCTACCAGAGCATAAAACCAACTCAAATGGGATTGTCTCTCAATATTGATATGTCAACAACAGCATTCATCGAACCACTCCCGGTTGTTGAATTTGTTGCTCAAGTGTTGGGGAAAGATGTAAGTTCAAGACCATTGTCCGATGCAGATCGAATAAAGGTTAAAAAAGCTCTTCGAGGTGTTAAAGTTGAAGTGACACATAGGGGAAATATTCGAAGGAAATACCGAATTTCTGGATTGACATCACAGCCAACAAGGGAGCTAATTTTTCCTGTCGATGAGGAGAAGAACATGAAATCAGTCATCGAGTATTTCCAGGAGGTGTATGGATACACCATTCAGTATCCTCATCTACCTTGTCTTCTCGTCGGAAGCCAAAAGAAAGTAAATTACTTACCGATGGAGGCTTGTAAGATACTCGAGGGACAGAGATACACCAAAAGGTTGGATGAGAAGCAGATAACTTCACTGTTGAAATCGTCATGCCAAAGACCACGAGAACAAGAAATGGACATTTTGCAGACCATTCGCCAAAATGGATACAAGCAAGATCCAATAGCAAAGGAGTTTGGGATCAATATTGACGATAAGCTTGCATCAGTGGAAGCTCGAGTCCTCCCAGCACCGTGGTTAAAGTACCATGATGCAGGGAAGGAAAAGGAATGTCATCCACAGCTAGGCCAGTGGAACATGTTAAATAAGAAAGTAATCAATGGAAGTACTGTTAACCACTGGGCTTGCATCAACTTTTCGTGTAACGTCCAAGAAAATGCAGCCCGTGGCTTTTGTCATCAGCTTGCCCAAATGTGCCAAGTCTCTGGAATGGAATTTAATTGTGAGCCCGTGATACCGGTTTATTATGCAAGACCAGATCAGGCAAAGAAGGCATTGAACTATGTATACAATGCTGCTGTTAACAAACTTGGAGGAAAAGAATTGGAGTTACTAATTGCCATTCTACCTGACAACAATGGTTCTTTGTATGGTACTCTGAAGAAAATTTGTGAGACGGATTTGGGGATGATTTCTCAGTGTTGTCTTACAAAGCATGTGTTAAAAATCAGCAAGCAATATCTGTCAAATGTGTCACTGAAAATAAATGTGAAGATGGGAGGAAGAAACACTGTACTTTTAGATGCTTTGAGATGGAAAATTCCTCTCGTTAGTGATATTCCAACGATTATATTTGGTGCTGATGTGACTCATCCAGAATCAGGAGAAGACTTTAGCCCATCGATTGCTGCTGTTGTAGCATCACAAGATTGGCCAGAAGTTACTAAATACGCGGGTTTAGTATGTGCTCAACCTCATAGACAAGAACTCATTCAAGATCTTTACCGGACTTGGCAAGATCCTCAACGAGGAACAATGTCTGGAGGGATGATAAGAGAACTTCTGTTGGCGTTCAAGAAAGCCACAGGACAGAAACCACTGAGAATAATATTCTACAGGGATGGTGTTAGTGACGGGCAGTTTTATCAGGTTCTACTTTATGAACTCGATGCAATTCGTAAGGCTTGTGCATCTCTTGAACCAGGTTACCAACCTCCGGTAACCTTCATAGTTGTCCAAAAACGTCACCACACACGTCTTTTGCCAAATAACCACAATGACAGAAATCACACTGACAGGAGTGGGAACATCCTACCTGGTACTGTGGTGGATACAAAAATATGTCATCCAACTGAATTCGATTTTTATTTATGTAGTCATGCTGGAATTCAGGGAACTAGTCGTCCTGCACATTATCACGTTCTCTGGGATGAAAATAATTTCTCCGCGGATGAAATGCAGTCTTTGACAAACAACCTTTGTTATACATATGCTCGTTGCACTCGTTCTGTTTCAGTAGTTCCTCCTGCATATTATGCTCACTTGGCGGCCTATGGAGCGCGTTTCTACGTAGAACCAGACTCACGTGACAACGGTTCTATACGTGGCACACGTGCAACGAATGGTTCTGTCAACGTCCGGCCGCTACCAGCATTGAAAGAGAAGGTGAAGAATGTGATGTTCTATTGCTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g006790.1.1SL2.50ch12:1200018..1205876934-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g006790.1SL2.50ch12:1200019..12058765,858-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g006790.1.1.1SL2.50ch12:1205541..1205876336-n/a
exonexon:Solyc12g006790.1.1.10SL2.50ch12:1203189..120326072-n/a
exonexon:Solyc12g006790.1.1.11SL2.50ch12:1202987..1203109123-n/a
exonexon:Solyc12g006790.1.1.12SL2.50ch12:1202711..1202870160-n/a
exonexon:Solyc12g006790.1.1.13SL2.50ch12:1202251..1202372122-2
exonexon:Solyc12g006790.1.1.14SL2.50ch12:1202010..1202147138-n/a
exonexon:Solyc12g006790.1.1.15SL2.50ch12:1201671..1201813143-n/a
exonexon:Solyc12g006790.1.1.16SL2.50ch12:1201528..120159063-1
exonexon:Solyc12g006790.1.1.17SL2.50ch12:1201341..120140464-1
exonexon:Solyc12g006790.1.1.18SL2.50ch12:1201120..1201255136-n/a
exonexon:Solyc12g006790.1.1.19SL2.50ch12:1200751..120082474-2
exonexon:Solyc12g006790.1.1.2SL2.50ch12:1205237..1205445209-n/a
exonexon:Solyc12g006790.1.1.20SL2.50ch12:1200572..120066695-n/a
exonexon:Solyc12g006790.1.1.21SL2.50ch12:1200454..120048532-1
exonexon:Solyc12g006790.1.1.22SL2.50ch12:1200019..1200191173-2
exonexon:Solyc12g006790.1.1.3SL2.50ch12:1204873..1205019147-1
exonexon:Solyc12g006790.1.1.4SL2.50ch12:1204651..1204784134-1
exonexon:Solyc12g006790.1.1.5SL2.50ch12:1204448..1204557110-2
exonexon:Solyc12g006790.1.1.6SL2.50ch12:1204198..1204304107-n/a
exonexon:Solyc12g006790.1.1.7SL2.50ch12:1203971..1204109139-1
exonexon:Solyc12g006790.1.1.8SL2.50ch12:1203767..1203883117-n/a
exonexon:Solyc12g006790.1.1.9SL2.50ch12:1203346..1203453108-n/a
intronintron:Solyc12g006790.1.1.10SL2.50ch12:1203261..1203345n/a-n/a
intronintron:Solyc12g006790.1.1.11SL2.50ch12:1203110..1203188n/a-n/a
intronintron:Solyc12g006790.1.1.12SL2.50ch12:1202871..1202986n/a-n/a
intronintron:Solyc12g006790.1.1.13SL2.50ch12:1202373..1202710n/a-n/a
intronintron:Solyc12g006790.1.1.14SL2.50ch12:1202148..1202250n/a-n/a
intronintron:Solyc12g006790.1.1.15SL2.50ch12:1201814..1202009n/a-n/a
intronintron:Solyc12g006790.1.1.16SL2.50ch12:1201591..1201670n/a-n/a
intronintron:Solyc12g006790.1.1.17SL2.50ch12:1201405..1201527n/a-n/a
intronintron:Solyc12g006790.1.1.18SL2.50ch12:1201256..1201340n/a-n/a
intronintron:Solyc12g006790.1.1.19SL2.50ch12:1200825..1201119n/a-n/a
intronintron:Solyc12g006790.1.1.2SL2.50ch12:1205446..1205540n/a-n/a
intronintron:Solyc12g006790.1.1.20SL2.50ch12:1200667..1200750n/a-n/a
intronintron:Solyc12g006790.1.1.21SL2.50ch12:1200486..1200571n/a-n/a
intronintron:Solyc12g006790.1.1.22SL2.50ch12:1200192..1200453n/a-n/a
intronintron:Solyc12g006790.1.1.3SL2.50ch12:1205020..1205236n/a-n/a
intronintron:Solyc12g006790.1.1.4SL2.50ch12:1204785..1204872n/a-n/a
intronintron:Solyc12g006790.1.1.5SL2.50ch12:1204558..1204650n/a-n/a
intronintron:Solyc12g006790.1.1.6SL2.50ch12:1204305..1204447n/a-n/a
intronintron:Solyc12g006790.1.1.7SL2.50ch12:1204110..1204197n/a-n/a
intronintron:Solyc12g006790.1.1.8SL2.50ch12:1203884..1203970n/a-n/a
intronintron:Solyc12g006790.1.1.9SL2.50ch12:1203454..1203766n/a-n/a
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http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17992620%2Fdetails feature 17992620
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