Notice: Due to a wide-spread power outage in the area, SGN was unavailable early on Sunday. We apologize for the inconvenience.

Solanum lycopersicum mRNA Solyc11g072600.1.1

mRNA details  
Name
Solyc11g072600.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g072600.1.1
Length
1,446
  
Description
AP2-like ethylene-responsive transcription factor At1g79700 (AHRD V1 *--- AP2L3_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
Location(s)
SL2.50ch11:55773865..55776747
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0003677
  • GO:0006355
Length
2883
Nb exon
9
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g072600.1.1 AP2-like ethylene-responsive transcription factor At1g79700 (AHRD V1 *--- AP2L3_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding

ATGATGTTGGATCTCAATCTAAATGCAATTTATGATGGGAAACATTCGTTAGCCGATGAATCGGGAAGTTCCAATTCATCGGCTAGGAATGTAGAAGCTAGTAGTAGTGCCGGAGATGACGAGACGTGCTCCACACGCGCCGCCGGCGATATGTTCGCTTTCAATTTCGACATACTTAAAGTTGGTGGTGGTGGTAGTGGCAGTGGTGGAGGTGAAACGAGACGGAGCTGTAGTAACAATGATGATGAAGAAGGATACGATGAGAATCGGTCCGATTTTGTAACTCAGCAATTGTTTCCGATGGATAACAATGCTGAGTTGAATCGGACCCACACCTCTCGGAGACCTGATTGGGTGGATCCGTCAGTGGATCCACCCAATACTGTTAGTTTCCGAGAGGTGCAGCAAATGGGACGCTTACAGCAGCAACAACAGCCAGTTAAAAAGAGCAGGAGGGGACCTAGGTCCAGAAGTTCACAGTACAGAGGTGTTACTTTTTATAGAAGAACTGGTAGATGGGAATCACATATATGGGACTGTGGAAAACAAGTATATTTGGGTGGATTTGACACTGCTCATGCAGCTGCTAGAGCGTATGATAGAGCTGCGATTAAGTTTCGAGGTGTTGATGCTGATATAAACTTTAACCTTAGTGATTATGAGGAAGATATGAAGCAGATGAAGAACTTGAGTAAGGAAGAATTCGTTCACGTGCTACGACGCCAGAGTACTGGTTTTTCGAGAGGGAGCTCGAAATATCGAGGAGTAACGTTGCATAAATGTGGGAGATGGGAGGCTCGAATGGGGCAATTCCTTGGAAAAAAGGCGTATGATAAGGCCGCAATCAAATGTAATGGAAGGGAGGCTGTTACCAACTTCGAGCCAAGTGCATATGAAGGGGAAATAAACTCTAACCCTCAGAGTGAAGGTAGCCAGCAGGATCTTGATTTAAACTTGGGGATCGCAACTTCTTCTCCGAAGGAAGTTGAAAGGTCTTCGAGTTTCCAGTATCATCCTTATGATATGCAAGAAGCATCGAAATCACAGATGGACAAATCTGGTTCACCGATAGTTGGTAGTTCACATTACAAAGCATTACCTGCAGTAACATCTGAACAAGCTCACTTGTGGAATGGAGCATATTCCAATTTAATTCCCAACTATGAGGAAAGAGTATCCGGGAAGAGAATAGACGTAGGTACCTCCCACGGACACCCAAACTGGGCAATGCAAATGCATAGTCAGGTCGGAACAACGCCATTGTCAATGTTCTCTGCTGCAGCATCATCAGGATTCTCAACTCCGGCTACCACTGCTTCGGCCTCTCAAATCTCTGGTCCCAACAACCCCAACACTCTCAATCTTTCGTTTGCTTCATATTCGTCACCATCAACGAATACAGCTCAATACTATTACCAGATCAGGCCACAACTACCACCTCCATAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g072600.1.1SL2.50ch11:55773864..55776747482-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g072600.1SL2.50ch11:55773865..557767472,883-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g072600.1.1.1SL2.50ch11:55776215..55776747533-n/a
exonexon:Solyc11g072600.1.1.2SL2.50ch11:55776113..5577613826-1
exonexon:Solyc11g072600.1.1.3SL2.50ch11:55775989..5577601931-2
exonexon:Solyc11g072600.1.1.4SL2.50ch11:55775805..5577589288-1
exonexon:Solyc11g072600.1.1.5SL2.50ch11:55775571..55775716146-n/a
exonexon:Solyc11g072600.1.1.6SL2.50ch11:55775031..55775134104-1
exonexon:Solyc11g072600.1.1.7SL2.50ch11:55774828..55774946119-2
exonexon:Solyc11g072600.1.1.8SL2.50ch11:55774480..55774599120-n/a
exonexon:Solyc11g072600.1.1.9SL2.50ch11:55773865..55774143279-n/a
intronintron:Solyc11g072600.1.1.2SL2.50ch11:55776139..55776214n/a-n/a
intronintron:Solyc11g072600.1.1.3SL2.50ch11:55776020..55776112n/a-n/a
intronintron:Solyc11g072600.1.1.4SL2.50ch11:55775893..55775988n/a-n/a
intronintron:Solyc11g072600.1.1.5SL2.50ch11:55775717..55775804n/a-n/a
intronintron:Solyc11g072600.1.1.6SL2.50ch11:55775135..55775570n/a-n/a
intronintron:Solyc11g072600.1.1.7SL2.50ch11:55774947..55775030n/a-n/a
intronintron:Solyc11g072600.1.1.8SL2.50ch11:55774600..55774827n/a-n/a
intronintron:Solyc11g072600.1.1.9SL2.50ch11:55774144..55774479n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17989826%2Fdetails feature 17989826
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)