Solanum lycopersicum mRNA Solyc11g071620.1.1

mRNA details  
Name
Solyc11g071620.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g071620.1.1
Length
4,086
  
Description
Aldehyde oxidase (AHRD V1 ***- Q9FV25_SOLLC); contains Interpro domain(s) IPR016208 Aldehyde oxidase/xanthine dehydrogenase
Location(s)
SL2.50ch11:55041360..55048950
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0009055
  • GO:0051536
  • GO:0050660
  • GO:0055114
Length
7591
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g071620.1.1 Aldehyde oxidase (AHRD V1 ***- Q9FV25_SOLLC); contains Interpro domain(s) IPR016208 Aldehyde oxidase/xanthine dehydrogenase

ATGGAGGAAAGACAGAAAAAGGGGAATTTGGTGTTTGCAGTTAATGGAGAGAGGTTTGAGTTGCCATCCGTTGATCCTTCGACAACTTTGCTTCACTTCTTGCGCTCGGAGACTTGTTACAAGAGTCCTAAGCTTGGTTGTGGTGAAGGTGGTTGTGGAGCTTGTGTTGTTCTGATCTCAAAGTATGAACCGAAGTTTAAAAAGGTGGAAGATTTTAGTGCAAGTTCGTGCCTTACACTTCTTTGTAGTTTAAATGGTTGTTCAATTACTACAAGTGAAGGCCTTGGGAACACCAGAGATGGTTTTCACTCTATTCATGAAAGATTTGCCGGTTTCTATGCTTCTCAATGCGGCTTTTGCACTCCTGGCCTGTGTATGTCACTTTTCTCAGCTCTCGTCAACGCTGATAAAGGAAACAAACCCAATCCTCCACCAGGATTCTCTAAGCTTACTTCATCTGAAGCTGAAAATGCCATAGCGGGAAACCTTTGTCGGTGCACTGGCTACCGGCCCATTGCTGATGCCTGCAAGACTTTTGCTGCTGATATTGATATAGAGGATTTGGGGTTCAATTCTTTTTGGAAAAAGGGAGACTCCAAGGAAATGAAAGTAAGTAAATTACCTCCCTATGATCCAACCAAGAATTTTAGTACATATCCTGAGTTCTTAAAAAGTGAATCCGCCACGAATTTGGACTCCTCAAAGTACCCTTGGTACAGTCCTGTTTCCATTAAGGAGCTATGGAGCTTGTTGAACTTCAATGTGACGGTAAATCGTGGAAGCTTTAAACTTGTCGTTGGGAATACCGGCACAGGTTATTATAAGGAAACTCAGCGATATGATCATTATGTCGATCTCAGGCACATTCCTGAACTCTCAATCATCAAAAGAGATCAGACAGGCATTGAAGTTGGAGCAACTGTGACTATCTCTAAATTCATCTCAGTCTTGAAAGAGGAAAGTCATATCAATTTGGGTTCATATGGGAAGTTGGTATCCCAAAAATTGGCTGACCACATGGAGAAGATTGCTTCACCATTTGTTAGAAACTCTGCTAGTGTGGGAGGAAATTTGGTCATGGCACAGAAGAATGGTTTTCCTTCTGATATCGCTACACTACTTCTCGGGCTTTCTGCTACTGTTAGCTTGATGACCAGTCATGGACCTGAAAACCACACATGGGAGGAGTTATTATCAAGACCACCACTAGACTCAAAGACTGTGCTTCTAAGTGTTTGCATCCCATTTAAGAAAGATCAAAGTTCTCACCAAACTCATTCTAGATTTTTGTTTGAAACCTATCGAGCTGCTCCACGACCTCATGGGAATGCATTGGCATATGTAAATGCTGCGTTCCAGGCTGATGTTTCTCACTGCAATAACGGCGTCCTTATAAACAATATCTATTTGGCATTTGGTGCATATGGCACAAAACATGCAACAAGGGCTAAAAAGGTAGAAGAATGTCTAACGGGGAAAATGTTGAGTGTACATGTTTTGTATGAAGCACTTAAATTAGTCAAATTAGCGGTGGTACCGGAAGATGGCACTTTACACCCTGAGTACAGATCAAGCTTGGCTGTCAGTTATGTTTTTGAGTTTCTTTATCCCTTAACTGATGTTCATCCTTCTATTTCTGGTGGTTTACTGGATGGAATTAATGACATCTCAGATAAGGAAGTTTCGGAAAGTAGTAATAATGGTTGCATTAGTAAGGGGAGAAAACAAAAACTGCTATCTTCTTCTAAGCAGGTTGTGGAGTTCAGTACGGAGTACTCTCCAGTAGGTGAACCGTTGAAGAAGATCGGAGCTGCCATGCAAGCTGCTGGCGAAGCTGTTTATGTAGATGACATTCCTTCACCACCAAACTGCTTGCATGGAGCGTTTATCTACAGTACAAAGCCATTAGCTGGTGTCAAGGGAATCCAGCTTGAGCCTAATCATTTAACAGACACCACCATAATTACTTACAAAGATATCCCAACAGGAGGAGCAAATACAGGAGCTGTTACACCATTTGGCTCCGAGCCCTTATTTGCTGAAGATCTCTCCCGTTGTGCTGGTGACAGAATTGCATTTGTGGTTGCTGATAGTCAGAGGTCTGCAGATTTGGCTGCAAGAACTGCCCTCATTGAATACGACACTACAAATGTAGATTCGGCCATTTTAACTGTTGAGGAAGCTGTTGAGAAATCTAGTTTTATCCAAGTCCCTCCACCTTTTCAGCCTGAACAGATTGGCGATTTCACAAAAGGAATGGCTGAAGCTGATCAAAAAATTCTCTCTGCTGAGTTAAGATTCGGTTCCGAGTACCATTTCTATATGGAGACACAGACTGCCCTTGCAATTCCAGATGAAGACAACTGCATGGTTGTTTATACTTCAAGCCAGTGCCCTGAGAATTCACAGAGTATGATTGCCAGTTGTCTTGGTGTTCCTGCACACAACATCCGCGTAATTACAAGAAGGCTTGGAGGTGCCTTTGGGGGCAAGTTTGTCAAAGCAATGCCTGTTTCCACAGCCTGTGCACTAGCAGCATACAAGTTGAGAAGACCTGTCAGGATATATGTCAACCGGAACAGTGACATGATAATGACAGGAGGACGACACCCAATGAAAGTAACATACAGTGTAGGATTCAAGTCGAGCGGAAAGATCACAGCATTACATCTTGATATATTGATAAATGCTGGGATCACAGATGATTTAAGCCCCATCATACCATCATATCTGATGAATACACTAAAAAAATATAATTGGGGTGCCTTATCTTTTGATATACAAGTATGCAAGACAAATCTCACCAGCAAAACGATCATGCGGGGTCCTGGGGAGGTGCAAGGATCTTATATCGCCGAAGCTATAGTAGAGCATGTCGCAAGTTTACTGTCGATTGAGGTGGACTCAGTCAGAAATGAGAATGTTCATACATTTGAAAGCCTTAACTTATTCTATGGTAACGTTGTAGCAGAAGGAGAATATACATTGCCTAGTATCATGGATAAGTTGGCAGTGTCGTCCAGCTTTTTCCAACGAAGCAAGATGATAGAACAGTTCAACCAGAAAAACACATGGAAGAAAAGGGGTATTTCTCGAGTACCAGCTGTGTACAATGCTTCGCAACGACCGACACCAGGAAAAGTCAGTATTCTGCAAGATGGGTCAATTGTTGTGGAGGTTGGAGGGGTTGATGTTGGCCAAGGGCTATGGACAAAGGTTAGACAGATGACTGCCTATGCTCTCGGTTCAATCGAAAGTAGTTGGGCCGAAGACCTTGTCGAGAAAGTACGAGTCATACAAGCAGACACCTTAAGTGTAGTGCAAGGTGGATTAACGGCTGGAAGTACCACATCGGAATCAAGCTGTGCAGCTGTTAAACTTTGCTGTGATATCTTGGTTGAAAGACTGACCGCTCTGAAGAAACAGTTGCAGGAAAAAAATGTTTCTGTTGATTGGCCAACGCTGATTCGCCAGGCACAAACACAATCAATAAACTTAGCAGCAAATTCTTATTATGTGCCAGAATTCTTGAGGTATTTGACCTTCGGCGCTGCTGTCAGTGAGGTGGAGATAGATGTTCTGACTGGAGAGACTACCATTTTGCAGTCTGATATTATTTACGACTGCGGACAGAGCTTGAATGCAGCTGTTGATTTGGGACAGGTTGAAGGAGCTTTCGTACAAGGAATCGGATTTTTCATGAAAGAAGAATATGTTACAAATGAAGATGGGTTAATGGTCTCAAATAGCACTTGGACATACAAGATCCCAACTATTGACACCATACCCCAGAATTTCAATGTTCATCTCGTAAACAGTGGACATCACGAACAACGTGTCCTCTCGTCCAAAACATCTGGTGAACCACCGCTGTTTCTGGCAGCTTCGGTCCATTGTGCAACAAGAGCAGCCATAAGAGCAGCACGTGAACAGCTCAAACGTTGGGACAAGCTCGACGAGTCTGCTTCAGAATTTTATCTAGATGTCCCTGCAATATTACCAGTTGTGAAAACACAGTGTGGCCTGGATTATGCAGAGAAGTTCGTAGAAACTCTGCTGGCTCGAAAATCAACGTGTTTCAAATGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g071620.1.1SL2.50ch11:55041359..550489501,362+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g071620.1SL2.50ch11:55041360..550489507,591+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g071620.1.1.1SL2.50ch11:55041360..55041507148+n/a
exonexon:Solyc11g071620.1.1.10SL2.50ch11:55048718..55048950233+2
exonexon:Solyc11g071620.1.1.2SL2.50ch11:55042848..550445271,680+2
exonexon:Solyc11g071620.1.1.3SL2.50ch11:55045155..55045408254+2
exonexon:Solyc11g071620.1.1.4SL2.50ch11:55045525..55045734210+n/a
exonexon:Solyc11g071620.1.1.5SL2.50ch11:55045983..55046201219+n/a
exonexon:Solyc11g071620.1.1.6SL2.50ch11:55046276..55047238963+n/a
exonexon:Solyc11g071620.1.1.7SL2.50ch11:55047481..5504757090+n/a
exonexon:Solyc11g071620.1.1.8SL2.50ch11:55048012..5504811099+n/a
exonexon:Solyc11g071620.1.1.9SL2.50ch11:55048255..55048444190+n/a
intronintron:Solyc11g071620.1.1.1SL2.50ch11:55041508..55042847n/a+n/a
intronintron:Solyc11g071620.1.1.2SL2.50ch11:55044528..55045154n/a+n/a
intronintron:Solyc11g071620.1.1.3SL2.50ch11:55045409..55045524n/a+n/a
intronintron:Solyc11g071620.1.1.4SL2.50ch11:55045735..55045982n/a+n/a
intronintron:Solyc11g071620.1.1.5SL2.50ch11:55046202..55046275n/a+n/a
intronintron:Solyc11g071620.1.1.6SL2.50ch11:55047239..55047480n/a+n/a
intronintron:Solyc11g071620.1.1.7SL2.50ch11:55047571..55048011n/a+n/a
intronintron:Solyc11g071620.1.1.8SL2.50ch11:55048111..55048254n/a+n/a
intronintron:Solyc11g071620.1.1.9SL2.50ch11:55048445..55048717n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17988560%2Fdetails feature 17988560
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