Solanum lycopersicum mRNA Solyc11g071580.1.1

mRNA details  
Name
Solyc11g071580.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc11g071580.1.1
Length
3,738
  
Description
Aldehyde oxidase (AHRD V1 ***- Q9FV23_SOLLC); contains Interpro domain(s) IPR016208 Aldehyde oxidase/xanthine dehydrogenase
Location(s)
SL2.50ch11:55006926..55013150
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0051536
  • GO:0050660
  • GO:0055114
Length
6225
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc11g071580.1.1 Aldehyde oxidase (AHRD V1 ***- Q9FV23_SOLLC); contains Interpro domain(s) IPR016208 Aldehyde oxidase/xanthine dehydrogenase

ATGGATGAAAGACAAAAAAAGGTGAGTTTGGTTTTGGCAGTTAATGGAGAGAGGTTTGAGTTGCCATGTGTTGATCCTTCTACAACTTTGCTTCACTTCTTGCGCTCTGAGACTTGTTTCAAGAGTCCAAAGCTTGGTTGTGGTGAAGATACCTACTTATCAAGCAAGGTTTGGAAAGATAGAATGAAGTTCTGTTGTGTTTTTGCCTTTGATGATATGAACTTGAGACCTCATGGTGGTTGTGGGGCTTGTGTTGTTCTGGTCTCGAAGTATGATCCCAATCTTAAAAAGATCGAAGATTTTAGCGTGAGTTCGTGCCTTACACTTCTTTGCAGTTTGAATGGTTGTTCAATTACTACAAGTGAAGGCCTTGGGAACACCAGAGATGGTTTTCACTCTATTCATGAAAGGTTTGCCGGTTTCCATGCTTCTCAATGCGGCTTTTGCACTCCTGGCATGTGTATGTCATTTTTTTCAGCTCTTGTCAATGCCGATAAAGGAAACAAACCCAATCCTCCACCAGGATTCTCTAAGCTTACTTCGTCTGAAGCTGAAAAGGCCATAGCAGGGAACCTTTGTCGATGCACTGGATACCGGCCTACTGCTGATGCCTGCAAGAGTTTTGCTGCTGACGTTGATATCGAGGATTTGGGGTTCAATTCTTTTTGGAAAAAAGGAGATTCCAAGGAAGTGAAAGTAAGTAAGTTACCTCCCTATGATCCAACCAAGAATTTCAGTACGTATCCCGAGTTCTTGAAAAGTGAATCTGCCACGAATTCAGAATCCTCAAGGAGGTACCCTTGGTACAGTCCTGTTTCCATTGAGGAGCTACGGAGCTTGTTGAACTCCAATGTGATGGAAAATGGTGCAAGCTTCAAACTTCTCGTTGGGAATACCGGCACAGGTTATTATAAGGAAACTCAGCGATATGATCATTACATTGATCTCAGGTACATTCCTGAACTCTCAATCATCAAAAGAGATCAGACTGGCATTGAAGTTGGAGCTGCTGTGACTATCTCTAAACTGATTTCATTCTTGAAAGAGGAAAACAAAGTCAATTTGGGTTCATACGGGACGTTGGTGTCCCAAAAACTAGCTAACCACATGGAGAAGATTGCTTCACCATTTGTTAGAAACTCGGCTAGTATGGGGGGAAATTTGGTTATGGCACAGAAGAATGGTTTTCCTTCAGATATTGCTACATTATTTCTTGGACTTTGTGCTACTGTTAGCTTAATGACCAGTCATGGAGTTGAAAAGCTCACATGGGAGGAGTTATTATCGGGACCACCGCTAGACTTAAGGAATGTGCTTCTAAGTGTTTTCATTCCATTTAAGCAAGATCAAAGTTCTTCAGAAATTCATTCTAAATTTCTGTTTGAAACCTTTCGAACCTCTCCACGACCTCATGGGAGTGCATTGGCATATATAAATGCCGCTTTCCAGGCTGATGTTTCTCTCTGCCAGAAGGGCCTCTTGATAAACAATATACAGTTGGCGTTCGATGCTTATGGTACAAAACATGCAACAAGGGCTAAAAAGGTAGAGGAATATCTAACCGGGAAGATATTAAATATACATGTTTTATATGAAGCACTTAAATTAGTCAAACTAGCAGTGGTACCAGAAGATGGCACTTTACACCCCGAGTACAGATCAAGCTTGGCCGTCAGTTATGTTTATGAGTTTCTTCATCCCTTCACTGATGTTCATTCTGCTATTTCTGGTGGTTTACACAACGGAATTAGTGACATCTTGGTTGAGGAACTTCCCGAAAGTTGTAATGATGGTTGCATTAGTCAGGAGAGAGAAAAAACACTACTGTCTTCTGCAAAGCAAGTCGTGGAATTAAGCAACGACTACTATCCAGTAGGTGAAGCTGTTTATGTAGATGACATTCCTTCACCACCAAACTGCCTGCATGGAGCATTTATCTATAGTACAAAATCATTAGCAGGTGTAAAGGGAATCCAGCTTGAGTCGAATCGATCAACAGATGGAGTCACCACCATTATTACTTCTAAAGATATTCCAAGTGGAGGGGCAAATGTAGGAGTTATTACAACGTCTGGTCCCGAGCCATTATTTGCAGATGATATCGCCCAATGTGCTGGTGATAGAATTGCTCTTGTGGTTGCTGACAATCAGAGGTCTGCTGATGTGGCTGCAAGAACAGCCCTCGTTGAATACGACACTGAAAACATATATTCTCCCATTTTAACCGTTGAGGAAGCTGTTGAGAAATCTAGCTTTTTCCAAGTCCCGCCATTTTTTAATCCAAAACAGGTTGGTGATTTCTCAAAAGGAATGTCTGAAGCAGATCACAAGATTCTCTCTGCCGAGATAAGACTCGGTTCGGAGTACTATTTTTATATGGAGACACAGACTGTCCTTGCAATTCCAGATGAAGACAACTGCATGGTTGTTTATACTTCAAGCCAGTGCCCTGAAAACATTCATCATGTTATTGCCAGTTGTCTTGGTGTTCCCCAACACAATATCCGCGTAATTACAAGAAGGGTTGGAGGTGGCTTTGGGGGAAAGGGAGTCAGATCAATGCCTGTATCCACTGCCTGTGCATTAGCAGCATACAAATTAAGACGGCCTGTCAGGATATGCGTCAACCGGAACACTGACATGATAATGACAGGAGGACGACACCCAATGAAAGTAACATACAGTGTAGGATACAAATCTAGCGGAAAGATCACAGCATTACATCTAGATATATTGATAAATGCCGGGATCACAGAAGATATAAGCCCCATTGTACCATCAAATGTGATAAAAGCACTAAAAAAATATGATTGGGGTGCCTTATCTTTCAATGTAAAACTGTGCAAGACGAATCTTTCCAGCAAATCAGCTATGCGGGCCCCTGGTGAAGTGCAAGGATCTTATATCGCCGAAGCTATAATGGAGCACGTTGCAGGTTTACTCTCGATGGAGGTGGACTCAGTCAGAAACAAAAATTTCCATACATTTGAAAGCCTTAACTTATTCTATGATAACATTGTAGCAGCAGGAGAATATACATTGCCTAGTATCATGGATAAGTTGGCAGTGTCCTCGAGCTTTTTCCAACGAAGCAAGATGATAGAACAGTTCAACCAGAATAACACATGGAAGAAAAGGGGTATTTCTCGAGTGCCAATTGTGTATGAAGTTATGCAACGACCAACCTCAGGAAAAGTCAGTATTCTACTAAGATGGATCGATCGTAGTAGAGGAAAAGTCAGTATTCTGCAAGTGTCCTCGAGCTATTTACAAAGTAGTTGGGCTGAAGACCTCGTGGAGAAAGTTCGAGTCATACAAGCAGACACCTTGAGCTTAGTGCAGGCTGGGTTTACAGCTGGAAGCACTACATCGGAAACAAGCTGTGAAGCTGTTAGACTTTGCTGTGATGTATTGGTTGAAAGACTAACCCCTTTGAAGAAACAGTTGCAGGAACAAAATGGCGCTGTTGATTGGCCAATGCTGATTCGCCAGGCACAAACGCAATCAGTAAGCTTAGCTGCAAATTCTTATTATGTACCAAAATTCGGTTCCAGGAGTTATTTGAACTTTGGCGCTGCTGTCAGTGAGGTGGAGATTAATATTCTGACTGGAGAGACTGCCATTTTGCAATCGGATATCATTTATGACTGCGGGCAAAGCTTGAATCCAGCCGTTGATTTGGGACAGGTTCTTCCCTTTGTCGTAGCTTATACATTGAGAAATGCGTCATCCATGTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc11g071580.1.1SL2.50ch11:55006925..550131501,246+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc11g071580.1SL2.50ch11:55006926..550131506,225+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc11g071580.1.1.1SL2.50ch11:55006926..55007073148+n/a
exonexon:Solyc11g071580.1.1.10SL2.50ch11:55013001..55013150150+n/a
exonexon:Solyc11g071580.1.1.2SL2.50ch11:55007190..5500727687+2
exonexon:Solyc11g071580.1.1.3SL2.50ch11:55008081..550097211,641+2
exonexon:Solyc11g071580.1.1.4SL2.50ch11:55010060..55010319260+2
exonexon:Solyc11g071580.1.1.5SL2.50ch11:55010431..55010640210+n/a
exonexon:Solyc11g071580.1.1.6SL2.50ch11:55010749..55010967219+n/a
exonexon:Solyc11g071580.1.1.7SL2.50ch11:55011042..55011751710+n/a
exonexon:Solyc11g071580.1.1.8SL2.50ch11:55011793..55012009217+1
exonexon:Solyc11g071580.1.1.9SL2.50ch11:55012510..5501260596+n/a
intronintron:Solyc11g071580.1.1.1SL2.50ch11:55007074..55007189n/a+n/a
intronintron:Solyc11g071580.1.1.2SL2.50ch11:55007277..55008080n/a+n/a
intronintron:Solyc11g071580.1.1.3SL2.50ch11:55009722..55010059n/a+n/a
intronintron:Solyc11g071580.1.1.4SL2.50ch11:55010320..55010430n/a+n/a
intronintron:Solyc11g071580.1.1.5SL2.50ch11:55010641..55010748n/a+n/a
intronintron:Solyc11g071580.1.1.6SL2.50ch11:55010968..55011041n/a+n/a
intronintron:Solyc11g071580.1.1.7SL2.50ch11:55011752..55011792n/a+n/a
intronintron:Solyc11g071580.1.1.8SL2.50ch11:55012010..55012509n/a+n/a
intronintron:Solyc11g071580.1.1.9SL2.50ch11:55012606..55013000n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17988492%2Fdetails feature 17988492
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